Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPAQ5VT25 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPAQ5VT25 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 AK1-201ENST00000223836 736 ntTSL 3 BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L2-201ENST00000561772 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L6-201ENST00000626483 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L1-201ENST00000627662 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L8-201ENST00000629013 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L3-201ENST00000630187 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L7-201ENST00000630678 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 DUX4L5-201ENST00000630834 1275 ntBASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
CDC42BPAQ5VT25 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC34.86■■■■□ 3.17
CDC42BPAQ5VT25 EI24-204ENST00000527235 1625 ntTSL 5 BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 AC091060.1-201ENST00000623524 1766 ntBASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CDC42BPAQ5VT25 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 ASB1-202ENST00000409297 878 ntTSL 5 BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 AC012414.1-201ENST00000556676 535 ntBASIC34.84■■■■□ 3.17
CDC42BPAQ5VT25 AL161729.1-201ENST00000604104 1402 ntBASIC34.83■■■■□ 3.17
CDC42BPAQ5VT25 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPAQ5VT25 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPAQ5VT25 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CDC42BPAQ5VT25 AC090192.1-201ENST00000517740 490 ntBASIC34.83■■■■□ 3.17
CDC42BPAQ5VT25 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC34.82■■■■□ 3.17
CDC42BPAQ5VT25 TSPY26P-201ENST00000476365 1326 ntBASIC34.82■■■■□ 3.17
CDC42BPAQ5VT25 AC092437.1-201ENST00000624794 1048 ntBASIC34.82■■■■□ 3.16
CDC42BPAQ5VT25 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CDC42BPAQ5VT25 YBX1P1-201ENST00000445822 960 ntBASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC34.81■■■■□ 3.16
CDC42BPAQ5VT25 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 HLA-L-211ENST00000482052 1765 ntBASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDC42BPAQ5VT25 AC145676.1-201ENST00000514988 2004 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 IGHV3-19-201ENST00000521488 291 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 pRNA.6-201ENST00000610482 90 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 pRNA.5-201ENST00000612139 90 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 pRNA.11-201ENST00000618423 90 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 pRNA.13-201ENST00000619112 90 ntBASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.79■■■■□ 3.16
CDC42BPAQ5VT25 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CDC42BPAQ5VT25 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms