Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 AC142381.2-201ENST00000566120 298 ntBASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCNYL3P0C7X3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 DUX4L19-201ENST00000557448 1267 ntBASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCNYL3P0C7X3 LINC01124-201ENST00000409786 2117 ntBASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 AC135279.3-201ENST00000610945 1311 ntBASIC21.74■■□□□ 1.07
CCNYL3P0C7X3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCNYL3P0C7X3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 AC092171.4-201ENST00000609130 632 ntBASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.72■■□□□ 1.07
CCNYL3P0C7X3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCNYL3P0C7X3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CCNYL3P0C7X3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 AL022069.1-201ENST00000568025 1636 ntBASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNYL3P0C7X3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 EDA-201ENST00000338901 1233 ntBASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 AC131274.2-201ENST00000580697 1507 ntBASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNYL3P0C7X3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 AC024257.2-201ENST00000549699 147 ntBASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 AL355001.2-201ENST00000620617 1191 ntBASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCNYL3P0C7X3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms