Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.06■□□□□ 0.64
TFF1P04155 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TFF1P04155 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TFF1P04155 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.06■□□□□ 0.64
TFF1P04155 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.06■□□□□ 0.64
TFF1P04155 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.06■□□□□ 0.64
TFF1P04155 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TFF1P04155 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.05■□□□□ 0.64
TFF1P04155 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.05■□□□□ 0.64
TFF1P04155 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TFF1P04155 GUSBP5-201ENST00000418136 578 ntBASIC19.05■□□□□ 0.64
TFF1P04155 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TFF1P04155 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.05■□□□□ 0.64
TFF1P04155 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.05■□□□□ 0.64
TFF1P04155 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.05■□□□□ 0.64
TFF1P04155 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.05■□□□□ 0.64
TFF1P04155 MTDHP2-201ENST00000601468 714 ntBASIC19.05■□□□□ 0.64
TFF1P04155 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TFF1P04155 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TFF1P04155 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
TFF1P04155 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.04■□□□□ 0.64
TFF1P04155 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.04■□□□□ 0.64
TFF1P04155 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TFF1P04155 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.03■□□□□ 0.64
TFF1P04155 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 AC010997.5-201ENST00000609182 354 ntBASIC19.03■□□□□ 0.64
TFF1P04155 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.03■□□□□ 0.64
TFF1P04155 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.03■□□□□ 0.64
TFF1P04155 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.03■□□□□ 0.64
TFF1P04155 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.03■□□□□ 0.64
TFF1P04155 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TFF1P04155 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TFF1P04155 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.02■□□□□ 0.64
TFF1P04155 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TFF1P04155 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TFF1P04155 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.02■□□□□ 0.64
TFF1P04155 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.02■□□□□ 0.64
TFF1P04155 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.02■□□□□ 0.64
TFF1P04155 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TFF1P04155 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TFF1P04155 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TFF1P04155 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.01■□□□□ 0.63
TFF1P04155 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TFF1P04155 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TFF1P04155 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TFF1P04155 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.01■□□□□ 0.63
TFF1P04155 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TFF1P04155 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TFF1P04155 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TFF1P04155 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TFF1P04155 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19■□□□□ 0.63
TFF1P04155 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19■□□□□ 0.63
TFF1P04155 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19■□□□□ 0.63
TFF1P04155 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19■□□□□ 0.63
TFF1P04155 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
TFF1P04155 C9orf163-202ENST00000624034 2573 ntBASIC18.99■□□□□ 0.63
TFF1P04155 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TFF1P04155 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TFF1P04155 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TFF1P04155 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TFF1P04155 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms