Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 IGHV3-19-201ENST00000521488 291 ntBASIC10.33□□□□□ -0.76
USH2AO75445 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
USH2AO75445 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC10.33□□□□□ -0.76
USH2AO75445 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
USH2AO75445 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC10.33□□□□□ -0.76
USH2AO75445 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
USH2AO75445 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.32□□□□□ -0.76
USH2AO75445 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
USH2AO75445 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC10.32□□□□□ -0.76
USH2AO75445 AC092118.2-201ENST00000613495 667 ntBASIC10.32□□□□□ -0.76
USH2AO75445 BID-214ENST00000617586 542 ntTSL 5 BASIC10.32□□□□□ -0.76
USH2AO75445 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
USH2AO75445 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 COX20-201ENST00000366528 568 ntTSL 2 BASIC10.32□□□□□ -0.76
USH2AO75445 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 AC011767.1-201ENST00000617410 1153 ntBASIC10.32□□□□□ -0.76
USH2AO75445 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
USH2AO75445 pRNA.6-201ENST00000610482 90 ntBASIC10.32□□□□□ -0.76
USH2AO75445 pRNA.5-201ENST00000612139 90 ntBASIC10.32□□□□□ -0.76
USH2AO75445 pRNA.11-201ENST00000618423 90 ntBASIC10.32□□□□□ -0.76
USH2AO75445 pRNA.13-201ENST00000619112 90 ntBASIC10.32□□□□□ -0.76
USH2AO75445 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC10.32□□□□□ -0.76
USH2AO75445 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
USH2AO75445 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
USH2AO75445 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
USH2AO75445 LBH-205ENST00000407930 756 ntTSL 2 BASIC10.31□□□□□ -0.76
USH2AO75445 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
USH2AO75445 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
USH2AO75445 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
USH2AO75445 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
USH2AO75445 GPX1P1-201ENST00000388829 606 ntBASIC10.31□□□□□ -0.76
USH2AO75445 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC10.31□□□□□ -0.76
USH2AO75445 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC10.31□□□□□ -0.76
USH2AO75445 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
USH2AO75445 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC10.31□□□□□ -0.76
USH2AO75445 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC10.31□□□□□ -0.76
USH2AO75445 TFG-210ENST00000620299 1289 ntTSL 5 BASIC10.31□□□□□ -0.76
USH2AO75445 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
USH2AO75445 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC10.31□□□□□ -0.76
USH2AO75445 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
USH2AO75445 RPS2P52-201ENST00000469610 820 ntBASIC10.31□□□□□ -0.76
USH2AO75445 AL354811.1-201ENST00000610286 706 ntBASIC10.31□□□□□ -0.76
USH2AO75445 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.3□□□□□ -0.76
USH2AO75445 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC10.3□□□□□ -0.76
USH2AO75445 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
USH2AO75445 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC10.3□□□□□ -0.76
USH2AO75445 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.3□□□□□ -0.76
USH2AO75445 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
USH2AO75445 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
USH2AO75445 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
USH2AO75445 AC098934.4-201ENST00000564127 592 ntBASIC10.3□□□□□ -0.76
USH2AO75445 PFKL-212ENST00000628044 129 ntTSL 3 BASIC10.3□□□□□ -0.76
USH2AO75445 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC10.29□□□□□ -0.76
USH2AO75445 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC10.29□□□□□ -0.76
USH2AO75445 MIR572-201ENST00000384983 95 ntBASIC10.29□□□□□ -0.76
USH2AO75445 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC10.29□□□□□ -0.76
USH2AO75445 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC10.29□□□□□ -0.76
USH2AO75445 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
USH2AO75445 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
USH2AO75445 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 AC092171.4-201ENST00000609130 632 ntBASIC10.28□□□□□ -0.76
USH2AO75445 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC10.28□□□□□ -0.76
USH2AO75445 MAX-217ENST00000557277 728 ntTSL 3 BASIC10.28□□□□□ -0.76
USH2AO75445 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC10.28□□□□□ -0.76
USH2AO75445 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
USH2AO75445 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC10.28□□□□□ -0.76
USH2AO75445 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.28□□□□□ -0.76
USH2AO75445 MDK-213ENST00000617138 635 ntTSL 2 BASIC10.28□□□□□ -0.76
USH2AO75445 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
USH2AO75445 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
USH2AO75445 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms