Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBAL3A6NHL2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 AC142381.2-201ENST00000566120 298 ntBASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBAL3A6NHL2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 AC010501.1-201ENST00000606270 1962 ntBASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 UNC93B3-201ENST00000308076 687 ntBASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBAL3A6NHL2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBAL3A6NHL2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 AC004448.1-201ENST00000458332 883 ntBASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 AL136162.1-201ENST00000607711 1078 ntBASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TUBAL3A6NHL2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBAL3A6NHL2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBAL3A6NHL2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TUBAL3A6NHL2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBAL3A6NHL2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 AC135279.3-201ENST00000610945 1311 ntBASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBAL3A6NHL2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 AC005703.6-201ENST00000623265 1329 ntBASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBAL3A6NHL2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TUBAL3A6NHL2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBAL3A6NHL2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms