Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 AL022069.1-201ENST00000568025 1636 ntBASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 DUX4L9-201ENST00000449051 1259 ntBASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA13Q9Y5I0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA13Q9Y5I0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA13Q9Y5I0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 LONRF2P2-201ENST00000439212 571 ntBASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 EP400NL-214ENST00000641289 2402 ntBASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHA13Q9Y5I0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA13Q9Y5I0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA13Q9Y5I0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA13Q9Y5I0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA13Q9Y5I0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PCDHA13Q9Y5I0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA13Q9Y5I0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 AC131274.2-201ENST00000580697 1507 ntBASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHA13Q9Y5I0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 CLDN5-201ENST00000403084 2357 ntBASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA13Q9Y5I0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 ALDH1A3-203ENST00000557963 1670 ntBASIC24.27■■□□□ 1.48
PCDHA13Q9Y5I0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA13Q9Y5I0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA13Q9Y5I0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA13Q9Y5I0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA13Q9Y5I0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms