Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.66■■□□□ 1.22
SLC6A18Q96N87 AC026271.2-201ENST00000428091 497 ntBASIC22.66■■□□□ 1.22
SLC6A18Q96N87 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A18Q96N87 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC6A18Q96N87 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SLC6A18Q96N87 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC6A18Q96N87 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC6A18Q96N87 AC020928.2-201ENST00000588717 2197 ntBASIC22.65■■□□□ 1.22
SLC6A18Q96N87 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC6A18Q96N87 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.64■■□□□ 1.21
SLC6A18Q96N87 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 AC091305.1-201ENST00000479476 895 ntBASIC22.63■■□□□ 1.21
SLC6A18Q96N87 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC6A18Q96N87 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC6A18Q96N87 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A18Q96N87 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A18Q96N87 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A18Q96N87 C17orf82-201ENST00000623772 1530 ntBASIC22.61■■□□□ 1.21
SLC6A18Q96N87 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC6A18Q96N87 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC6A18Q96N87 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A18Q96N87 AC011298.3-201ENST00000615796 283 ntBASIC22.59■■□□□ 1.21
SLC6A18Q96N87 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A18Q96N87 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A18Q96N87 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC6A18Q96N87 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
SLC6A18Q96N87 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 CA15P2-201ENST00000611168 834 ntBASIC22.58■■□□□ 1.21
SLC6A18Q96N87 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SLC6A18Q96N87 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC6A18Q96N87 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SLC6A18Q96N87 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC6A18Q96N87 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SLC6A18Q96N87 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
SLC6A18Q96N87 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 AC006455.2-201ENST00000429931 906 ntBASIC22.57■■□□□ 1.2
SLC6A18Q96N87 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 AL138724.1-201ENST00000606771 1088 ntBASIC22.57■■□□□ 1.2
SLC6A18Q96N87 AC092666.2-201ENST00000613287 246 ntBASIC22.57■■□□□ 1.2
SLC6A18Q96N87 HLA-L-211ENST00000482052 1765 ntBASIC22.57■■□□□ 1.2
SLC6A18Q96N87 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SLC6A18Q96N87 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A18Q96N87 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A18Q96N87 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SLC6A18Q96N87 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC6A18Q96N87 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms