Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 AL592295.1-201ENST00000400984 884 ntBASIC20.06■□□□□ 0.8
ODF4Q2M2E3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.06■□□□□ 0.8
ODF4Q2M2E3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 PKD1P6-201ENST00000343738 4769 ntBASIC20.05■□□□□ 0.8
ODF4Q2M2E3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ODF4Q2M2E3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ODF4Q2M2E3 ANOS2P-203ENST00000472227 1816 ntBASIC20.04■□□□□ 0.8
ODF4Q2M2E3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ODF4Q2M2E3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 RARRES2P2-201ENST00000394842 485 ntBASIC20.02■□□□□ 0.8
ODF4Q2M2E3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 U85056.1-201ENST00000616429 682 ntBASIC20.02■□□□□ 0.8
ODF4Q2M2E3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ODF4Q2M2E3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ODF4Q2M2E3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ODF4Q2M2E3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ODF4Q2M2E3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.02■□□□□ 0.79
ODF4Q2M2E3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ODF4Q2M2E3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ODF4Q2M2E3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20■□□□□ 0.79
ODF4Q2M2E3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20■□□□□ 0.79
ODF4Q2M2E3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20■□□□□ 0.79
ODF4Q2M2E3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ODF4Q2M2E3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ODF4Q2M2E3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20■□□□□ 0.79
ODF4Q2M2E3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
ODF4Q2M2E3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20■□□□□ 0.79
ODF4Q2M2E3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20■□□□□ 0.79
ODF4Q2M2E3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
ODF4Q2M2E3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ODF4Q2M2E3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ODF4Q2M2E3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 AC129492.7-201ENST00000622992 756 ntBASIC19.98■□□□□ 0.79
ODF4Q2M2E3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ODF4Q2M2E3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ODF4Q2M2E3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ODF4Q2M2E3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ODF4Q2M2E3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.97■□□□□ 0.79
ODF4Q2M2E3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms