Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMIM11AP58511 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM11AP58511 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM11AP58511 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMIM11AP58511 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMIM11AP58511 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM11AP58511 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.96■□□□□ 0.95
SMIM11AP58511 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM11AP58511 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMIM11AP58511 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SMIM11AP58511 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.95■□□□□ 0.94
SMIM11AP58511 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 AL592293.1-201ENST00000502889 1188 ntBASIC20.95■□□□□ 0.94
SMIM11AP58511 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.95■□□□□ 0.94
SMIM11AP58511 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.95■□□□□ 0.94
SMIM11AP58511 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMIM11AP58511 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
SMIM11AP58511 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.94■□□□□ 0.94
SMIM11AP58511 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.94■□□□□ 0.94
SMIM11AP58511 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.94■□□□□ 0.94
SMIM11AP58511 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMIM11AP58511 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMIM11AP58511 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMIM11AP58511 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMIM11AP58511 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.92■□□□□ 0.94
SMIM11AP58511 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.92■□□□□ 0.94
SMIM11AP58511 SPCS2P3-201ENST00000500401 656 ntBASIC20.92■□□□□ 0.94
SMIM11AP58511 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 AC233723.2-201ENST00000623798 2106 ntBASIC20.92■□□□□ 0.94
SMIM11AP58511 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMIM11AP58511 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.91■□□□□ 0.94
SMIM11AP58511 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SMIM11AP58511 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMIM11AP58511 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM11AP58511 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
SMIM11AP58511 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SMIM11AP58511 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM11AP58511 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMIM11AP58511 PKD1P6-201ENST00000343738 4769 ntBASIC20.9■□□□□ 0.94
SMIM11AP58511 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 AC011551.1-201ENST00000614101 683 ntBASIC20.9■□□□□ 0.94
SMIM11AP58511 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
SMIM11AP58511 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMIM11AP58511 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SMIM11AP58511 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM11AP58511 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM11AP58511 LONRF2P2-201ENST00000439212 571 ntBASIC20.89■□□□□ 0.93
SMIM11AP58511 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM11AP58511 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMIM11AP58511 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM11AP58511 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM11AP58511 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM11AP58511 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.88■□□□□ 0.93
SMIM11AP58511 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM11AP58511 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.88■□□□□ 0.93
SMIM11AP58511 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.88■□□□□ 0.93
SMIM11AP58511 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM11AP58511 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM11AP58511 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM11AP58511 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMIM11AP58511 DUX4L9-201ENST00000449051 1259 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms