Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 EDA-201ENST00000338901 1233 ntBASIC25.23■■□□□ 1.63
COL1A2P08123 SYT6-210ENST00000641643 1587 ntBASIC25.23■■□□□ 1.63
COL1A2P08123 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.23■■□□□ 1.63
COL1A2P08123 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL1A2P08123 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A2P08123 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
COL1A2P08123 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A2P08123 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A2P08123 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.22■■□□□ 1.63
COL1A2P08123 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.22■■□□□ 1.63
COL1A2P08123 AC099791.2-201ENST00000605725 427 ntBASIC25.22■■□□□ 1.63
COL1A2P08123 AC241377.3-202ENST00000626088 1088 ntBASIC25.22■■□□□ 1.63
COL1A2P08123 AC241585.3-202ENST00000628937 1088 ntBASIC25.22■■□□□ 1.63
COL1A2P08123 AC245100.8-202ENST00000629247 1058 ntBASIC25.22■■□□□ 1.63
COL1A2P08123 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL1A2P08123 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL1A2P08123 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL1A2P08123 SUDS3P1-201ENST00000505831 966 ntBASIC25.21■■□□□ 1.63
COL1A2P08123 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL1A2P08123 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL1A2P08123 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.21■■□□□ 1.63
COL1A2P08123 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.21■■□□□ 1.63
COL1A2P08123 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.21■■□□□ 1.63
COL1A2P08123 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL1A2P08123 AC138932.3-201ENST00000567634 1902 ntBASIC25.21■■□□□ 1.63
COL1A2P08123 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
COL1A2P08123 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.2■■□□□ 1.63
COL1A2P08123 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.2■■□□□ 1.63
COL1A2P08123 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.2■■□□□ 1.63
COL1A2P08123 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL1A2P08123 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL1A2P08123 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL1A2P08123 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.2■■□□□ 1.62
COL1A2P08123 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL1A2P08123 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
COL1A2P08123 AL138724.1-201ENST00000606771 1088 ntBASIC25.19■■□□□ 1.62
COL1A2P08123 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.19■■□□□ 1.62
COL1A2P08123 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL1A2P08123 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL1A2P08123 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL1A2P08123 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL1A2P08123 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
COL1A2P08123 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL1A2P08123 SERBP1P1-201ENST00000396021 1160 ntBASIC25.18■■□□□ 1.62
COL1A2P08123 AC142381.2-201ENST00000566120 298 ntBASIC25.18■■□□□ 1.62
COL1A2P08123 AL355001.2-201ENST00000620617 1191 ntBASIC25.18■■□□□ 1.62
COL1A2P08123 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
COL1A2P08123 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
COL1A2P08123 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
COL1A2P08123 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.18■■□□□ 1.62
COL1A2P08123 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL1A2P08123 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL1A2P08123 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
COL1A2P08123 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
COL1A2P08123 AC011298.3-201ENST00000615796 283 ntBASIC25.17■■□□□ 1.62
COL1A2P08123 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
COL1A2P08123 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.16■■□□□ 1.62
COL1A2P08123 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.16■■□□□ 1.62
COL1A2P08123 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL1A2P08123 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
COL1A2P08123 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.16■■□□□ 1.62
COL1A2P08123 MIR935-201ENST00000401179 91 ntBASIC25.16■■□□□ 1.62
COL1A2P08123 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.16■■□□□ 1.62
COL1A2P08123 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.15■■□□□ 1.62
COL1A2P08123 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.15■■□□□ 1.62
COL1A2P08123 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.15■■□□□ 1.62
COL1A2P08123 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.15■■□□□ 1.62
COL1A2P08123 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.15■■□□□ 1.62
COL1A2P08123 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL1A2P08123 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL1A2P08123 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL1A2P08123 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
COL1A2P08123 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
COL1A2P08123 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.14■■□□□ 1.61
COL1A2P08123 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.14■■□□□ 1.61
COL1A2P08123 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL1A2P08123 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.13■■□□□ 1.61
COL1A2P08123 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.13■■□□□ 1.61
COL1A2P08123 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.13■■□□□ 1.61
COL1A2P08123 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL1A2P08123 MIR4767-201ENST00000582827 78 ntBASIC25.13■■□□□ 1.61
COL1A2P08123 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
COL1A2P08123 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.13■■□□□ 1.61
COL1A2P08123 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms