Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC4O95801 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC4O95801 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.33■■□□□ 1.33
TTC4O95801 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TTC4O95801 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.33■■□□□ 1.33
TTC4O95801 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TTC4O95801 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TTC4O95801 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 DUX4L9-201ENST00000449051 1259 ntBASIC23.33■■□□□ 1.33
TTC4O95801 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
TTC4O95801 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TTC4O95801 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TTC4O95801 EP400NL-214ENST00000641289 2402 ntBASIC23.33■■□□□ 1.33
TTC4O95801 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC4O95801 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
TTC4O95801 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TTC4O95801 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
TTC4O95801 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TTC4O95801 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.32■■□□□ 1.32
TTC4O95801 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.32■■□□□ 1.32
TTC4O95801 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC4O95801 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.32■■□□□ 1.32
TTC4O95801 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TTC4O95801 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC4O95801 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TTC4O95801 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.31■■□□□ 1.32
TTC4O95801 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC4O95801 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TTC4O95801 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TTC4O95801 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TTC4O95801 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC4O95801 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC4O95801 HSD17B1P1-201ENST00000590052 955 ntBASIC23.3■■□□□ 1.32
TTC4O95801 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TTC4O95801 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TTC4O95801 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
TTC4O95801 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TTC4O95801 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TTC4O95801 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC4O95801 C1orf229-201ENST00000623686 2258 ntBASIC23.29■■□□□ 1.32
TTC4O95801 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
TTC4O95801 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TTC4O95801 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TTC4O95801 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TTC4O95801 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC4O95801 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC4O95801 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.28■■□□□ 1.32
TTC4O95801 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC4O95801 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
TTC4O95801 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC4O95801 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.27■■□□□ 1.32
TTC4O95801 AL161729.1-201ENST00000604104 1402 ntBASIC23.27■■□□□ 1.32
TTC4O95801 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC4O95801 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC4O95801 U85056.1-201ENST00000616429 682 ntBASIC23.27■■□□□ 1.32
TTC4O95801 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC4O95801 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC4O95801 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.26■■□□□ 1.31
TTC4O95801 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC4O95801 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TTC4O95801 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 LONRF2P2-201ENST00000439212 571 ntBASIC23.26■■□□□ 1.31
TTC4O95801 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC4O95801 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
TTC4O95801 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TTC4O95801 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC4O95801 AC129492.7-201ENST00000622992 756 ntBASIC23.25■■□□□ 1.31
TTC4O95801 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TTC4O95801 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC4O95801 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC4O95801 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.24■■□□□ 1.31
TTC4O95801 LINC00565-201ENST00000562710 2331 ntBASIC23.24■■□□□ 1.31
TTC4O95801 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TTC4O95801 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TTC4O95801 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
TTC4O95801 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC4O95801 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.23■■□□□ 1.31
TTC4O95801 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC4O95801 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TTC4O95801 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.23■■□□□ 1.31
TTC4O95801 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms