Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A3O75365 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A3O75365 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.56■□□□□ 0.88
PTP4A3O75365 ALDH1A3-203ENST00000557963 1670 ntBASIC20.56■□□□□ 0.88
PTP4A3O75365 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.56■□□□□ 0.88
PTP4A3O75365 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTP4A3O75365 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTP4A3O75365 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTP4A3O75365 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.55■□□□□ 0.88
PTP4A3O75365 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.55■□□□□ 0.88
PTP4A3O75365 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTP4A3O75365 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTP4A3O75365 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTP4A3O75365 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTP4A3O75365 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTP4A3O75365 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.54■□□□□ 0.88
PTP4A3O75365 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTP4A3O75365 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTP4A3O75365 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.54■□□□□ 0.88
PTP4A3O75365 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTP4A3O75365 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.54■□□□□ 0.88
PTP4A3O75365 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PTP4A3O75365 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTP4A3O75365 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTP4A3O75365 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTP4A3O75365 AC004987.1-201ENST00000428627 508 ntBASIC20.53■□□□□ 0.88
PTP4A3O75365 AC120024.1-201ENST00000562672 995 ntBASIC20.53■□□□□ 0.88
PTP4A3O75365 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.53■□□□□ 0.88
PTP4A3O75365 PVT1_1.1-201ENST00000615125 194 ntBASIC20.53■□□□□ 0.88
PTP4A3O75365 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.53■□□□□ 0.88
PTP4A3O75365 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PTP4A3O75365 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTP4A3O75365 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PTP4A3O75365 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.52■□□□□ 0.88
PTP4A3O75365 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTP4A3O75365 ATP5G2P3-201ENST00000429083 425 ntBASIC20.52■□□□□ 0.88
PTP4A3O75365 AC074183.2-201ENST00000623112 922 ntBASIC20.52■□□□□ 0.88
PTP4A3O75365 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.52■□□□□ 0.88
PTP4A3O75365 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTP4A3O75365 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PTP4A3O75365 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PTP4A3O75365 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTP4A3O75365 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTP4A3O75365 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
PTP4A3O75365 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTP4A3O75365 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 KRT18P24-201ENST00000344739 1156 ntBASIC20.51■□□□□ 0.87
PTP4A3O75365 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
PTP4A3O75365 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
PTP4A3O75365 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.51■□□□□ 0.87
PTP4A3O75365 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTP4A3O75365 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
PTP4A3O75365 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTP4A3O75365 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTP4A3O75365 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTP4A3O75365 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.5■□□□□ 0.87
PTP4A3O75365 BHLHE23-202ENST00000612929 1109 ntBASIC20.5■□□□□ 0.87
PTP4A3O75365 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTP4A3O75365 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTP4A3O75365 AF131216.4-201ENST00000638924 1588 ntBASIC20.5■□□□□ 0.87
PTP4A3O75365 CLDN5-201ENST00000403084 2357 ntBASIC20.5■□□□□ 0.87
PTP4A3O75365 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.5■□□□□ 0.87
PTP4A3O75365 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.5■□□□□ 0.87
PTP4A3O75365 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTP4A3O75365 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 AC079834.2-201ENST00000609776 1949 ntBASIC20.49■□□□□ 0.87
PTP4A3O75365 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTP4A3O75365 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTP4A3O75365 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTP4A3O75365 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTP4A3O75365 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTP4A3O75365 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTP4A3O75365 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms