Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.76■■□□□ 1.23
TBC1D3EA0A087X179 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TBC1D3EA0A087X179 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TBC1D3EA0A087X179 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TBC1D3EA0A087X179 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.75■■□□□ 1.23
TBC1D3EA0A087X179 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.75■■□□□ 1.23
TBC1D3EA0A087X179 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TBC1D3EA0A087X179 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 AP003733.4-201ENST00000623785 1697 ntBASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TBC1D3EA0A087X179 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 SERBP1P1-201ENST00000396021 1160 ntBASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 ZNRF2P3-201ENST00000424200 374 ntBASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 AC135731.1-201ENST00000569415 2548 ntBASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 C17orf82-201ENST00000623772 1530 ntBASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TBC1D3EA0A087X179 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TBC1D3EA0A087X179 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
TBC1D3EA0A087X179 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
TBC1D3EA0A087X179 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 AC241377.3-202ENST00000626088 1088 ntBASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 AC241585.3-202ENST00000628937 1088 ntBASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 AC245100.8-202ENST00000629247 1058 ntBASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.7■■□□□ 1.22
TBC1D3EA0A087X179 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 ALDH1A3-203ENST00000557963 1670 ntBASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 MIR4767-201ENST00000582827 78 ntBASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 AL136967.2-201ENST00000623968 743 ntBASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TBC1D3EA0A087X179 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 AF213884.3-201ENST00000563833 479 ntBASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TBC1D3EA0A087X179 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms