Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 AL022069.1-201ENST00000568025 1636 ntBASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF407Q9C0G0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF407Q9C0G0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 AC020928.2-201ENST00000588717 2197 ntBASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 AL031432.3-201ENST00000607698 485 ntBASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF407Q9C0G0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF407Q9C0G0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.64■□□□□ 0.9
ZNF407Q9C0G0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF407Q9C0G0 AC024257.2-201ENST00000549699 147 ntBASIC20.64■□□□□ 0.89
ZNF407Q9C0G0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF407Q9C0G0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF407Q9C0G0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF407Q9C0G0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF407Q9C0G0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF407Q9C0G0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 AC135279.3-201ENST00000610945 1311 ntBASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 C17orf82-201ENST00000623772 1530 ntBASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF407Q9C0G0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 UNC93B3-201ENST00000308076 687 ntBASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF407Q9C0G0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 PBX2P1-201ENST00000493219 1291 ntBASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF407Q9C0G0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF407Q9C0G0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF407Q9C0G0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF407Q9C0G0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF407Q9C0G0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF407Q9C0G0 HLA-L-211ENST00000482052 1765 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms