Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHCHD1Q96BP2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CHCHD1Q96BP2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHCHD1Q96BP2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHCHD1Q96BP2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CHCHD1Q96BP2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 SETD8P1-201ENST00000623146 1180 ntBASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD1Q96BP2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHCHD1Q96BP2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 ESRRAP2-201ENST00000418437 1549 ntBASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHCHD1Q96BP2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 MIR6090-201ENST00000622481 60 ntBASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHCHD1Q96BP2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 MIR762-201ENST00000390236 83 ntBASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHCHD1Q96BP2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms