Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RETREG2Q8NC44 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RETREG2Q8NC44 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RETREG2Q8NC44 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.91■■□□□ 1.74
RETREG2Q8NC44 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RETREG2Q8NC44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.91■■□□□ 1.74
RETREG2Q8NC44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RETREG2Q8NC44 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RETREG2Q8NC44 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RETREG2Q8NC44 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
RETREG2Q8NC44 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RETREG2Q8NC44 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RETREG2Q8NC44 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RETREG2Q8NC44 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RETREG2Q8NC44 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 AC106739.1-201ENST00000617035 715 ntBASIC25.88■■□□□ 1.73
RETREG2Q8NC44 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.88■■□□□ 1.73
RETREG2Q8NC44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.87■■□□□ 1.73
RETREG2Q8NC44 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.87■■□□□ 1.73
RETREG2Q8NC44 MIR6722-201ENST00000617286 78 ntBASIC25.87■■□□□ 1.73
RETREG2Q8NC44 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RETREG2Q8NC44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RETREG2Q8NC44 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RETREG2Q8NC44 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 AC142381.2-201ENST00000566120 298 ntBASIC25.86■■□□□ 1.73
RETREG2Q8NC44 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RETREG2Q8NC44 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RETREG2Q8NC44 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 SNX5-217ENST00000606557 1087 ntBASIC25.84■■□□□ 1.73
RETREG2Q8NC44 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
RETREG2Q8NC44 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.83■■□□□ 1.73
RETREG2Q8NC44 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
RETREG2Q8NC44 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RETREG2Q8NC44 LINC01124-201ENST00000409786 2117 ntBASIC25.82■■□□□ 1.72
RETREG2Q8NC44 UNC93B3-201ENST00000308076 687 ntBASIC25.82■■□□□ 1.72
RETREG2Q8NC44 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.82■■□□□ 1.72
RETREG2Q8NC44 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.82■■□□□ 1.72
RETREG2Q8NC44 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.82■■□□□ 1.72
RETREG2Q8NC44 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RETREG2Q8NC44 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RETREG2Q8NC44 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RETREG2Q8NC44 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.8■■□□□ 1.72
RETREG2Q8NC44 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RETREG2Q8NC44 ZNRF2P3-201ENST00000424200 374 ntBASIC25.8■■□□□ 1.72
RETREG2Q8NC44 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RETREG2Q8NC44 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.8■■□□□ 1.72
RETREG2Q8NC44 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 AL136162.1-201ENST00000607711 1078 ntBASIC25.79■■□□□ 1.72
RETREG2Q8NC44 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
RETREG2Q8NC44 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms