Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPSF7Q8N684 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPSF7Q8N684 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CPSF7Q8N684 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.32■■□□□ 1.16
CPSF7Q8N684 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF7Q8N684 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CPSF7Q8N684 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF7Q8N684 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CPSF7Q8N684 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CPSF7Q8N684 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPSF7Q8N684 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.31■■□□□ 1.16
CPSF7Q8N684 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CPSF7Q8N684 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPSF7Q8N684 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CPSF7Q8N684 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.3■■□□□ 1.16
CPSF7Q8N684 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF7Q8N684 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CPSF7Q8N684 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF7Q8N684 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CPSF7Q8N684 BHLHE23-202ENST00000612929 1109 ntBASIC22.3■■□□□ 1.16
CPSF7Q8N684 MIR6765-201ENST00000614092 87 ntBASIC22.3■■□□□ 1.16
CPSF7Q8N684 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF7Q8N684 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.3■■□□□ 1.16
CPSF7Q8N684 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPSF7Q8N684 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF7Q8N684 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
CPSF7Q8N684 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF7Q8N684 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CPSF7Q8N684 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF7Q8N684 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.29■■□□□ 1.16
CPSF7Q8N684 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CPSF7Q8N684 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPSF7Q8N684 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CPSF7Q8N684 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.28■■□□□ 1.16
CPSF7Q8N684 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF7Q8N684 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPSF7Q8N684 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 AC233723.2-201ENST00000623798 2106 ntBASIC22.27■■□□□ 1.16
CPSF7Q8N684 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF7Q8N684 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF7Q8N684 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPSF7Q8N684 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 AC018755.3-202ENST00000596210 929 ntBASIC22.27■■□□□ 1.16
CPSF7Q8N684 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.27■■□□□ 1.16
CPSF7Q8N684 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CPSF7Q8N684 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.27■■□□□ 1.15
CPSF7Q8N684 ANOS2P-203ENST00000472227 1816 ntBASIC22.27■■□□□ 1.15
CPSF7Q8N684 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.26■■□□□ 1.15
CPSF7Q8N684 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.26■■□□□ 1.15
CPSF7Q8N684 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.26■■□□□ 1.15
CPSF7Q8N684 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPSF7Q8N684 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF7Q8N684 AC139795.1-202ENST00000500444 432 ntBASIC22.25■■□□□ 1.15
CPSF7Q8N684 AC010980.1-201ENST00000587192 1142 ntBASIC22.25■■□□□ 1.15
CPSF7Q8N684 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF7Q8N684 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF7Q8N684 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF7Q8N684 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPSF7Q8N684 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.24■■□□□ 1.15
CPSF7Q8N684 DUSP8P3-201ENST00000399571 1760 ntBASIC22.24■■□□□ 1.15
CPSF7Q8N684 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.24■■□□□ 1.15
CPSF7Q8N684 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPSF7Q8N684 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.23■■□□□ 1.15
CPSF7Q8N684 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CPSF7Q8N684 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
CPSF7Q8N684 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPSF7Q8N684 AC092068.2-201ENST00000590491 1708 ntBASIC22.23■■□□□ 1.15
CPSF7Q8N684 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms