Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BEST1O76090 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BEST1O76090 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BEST1O76090 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.18■■□□□ 1.46
BEST1O76090 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BEST1O76090 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.18■■□□□ 1.46
BEST1O76090 MIR3621-201ENST00000580529 85 ntBASIC24.18■■□□□ 1.46
BEST1O76090 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
BEST1O76090 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.18■■□□□ 1.46
BEST1O76090 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BEST1O76090 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.17■■□□□ 1.46
BEST1O76090 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
BEST1O76090 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BEST1O76090 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BEST1O76090 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
BEST1O76090 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.16■■□□□ 1.46
BEST1O76090 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.16■■□□□ 1.46
BEST1O76090 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
BEST1O76090 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.16■■□□□ 1.46
BEST1O76090 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.16■■□□□ 1.46
BEST1O76090 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.16■■□□□ 1.46
BEST1O76090 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.16■■□□□ 1.46
BEST1O76090 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BEST1O76090 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.15■■□□□ 1.46
BEST1O76090 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
BEST1O76090 LINC00543-201ENST00000567234 1845 ntBASIC24.15■■□□□ 1.46
BEST1O76090 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
BEST1O76090 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
BEST1O76090 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
BEST1O76090 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.15■■□□□ 1.46
BEST1O76090 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.15■■□□□ 1.46
BEST1O76090 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.15■■□□□ 1.46
BEST1O76090 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 AL161729.1-201ENST00000604104 1402 ntBASIC24.15■■□□□ 1.46
BEST1O76090 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.15■■□□□ 1.46
BEST1O76090 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
BEST1O76090 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.14■■□□□ 1.46
BEST1O76090 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BEST1O76090 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
BEST1O76090 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.14■■□□□ 1.45
BEST1O76090 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.14■■□□□ 1.45
BEST1O76090 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.14■■□□□ 1.45
BEST1O76090 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
BEST1O76090 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.13■■□□□ 1.45
BEST1O76090 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
BEST1O76090 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.13■■□□□ 1.45
BEST1O76090 AC004812.2-201ENST00000611079 2094 ntBASIC24.13■■□□□ 1.45
BEST1O76090 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
BEST1O76090 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.13■■□□□ 1.45
BEST1O76090 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BEST1O76090 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BEST1O76090 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
BEST1O76090 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
BEST1O76090 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.12■■□□□ 1.45
BEST1O76090 AL356740.2-201ENST00000601559 647 ntBASIC24.12■■□□□ 1.45
BEST1O76090 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.12■■□□□ 1.45
BEST1O76090 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
BEST1O76090 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
BEST1O76090 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.11■■□□□ 1.45
BEST1O76090 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
BEST1O76090 AC131281.2-201ENST00000520478 145 ntBASIC24.11■■□□□ 1.45
BEST1O76090 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.11■■□□□ 1.45
BEST1O76090 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.11■■□□□ 1.45
BEST1O76090 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.11■■□□□ 1.45
BEST1O76090 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
BEST1O76090 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
BEST1O76090 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
BEST1O76090 AC005703.6-201ENST00000623265 1329 ntBASIC24.1■■□□□ 1.45
BEST1O76090 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BEST1O76090 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.1■■□□□ 1.45
BEST1O76090 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
BEST1O76090 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BEST1O76090 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.1■■□□□ 1.45
BEST1O76090 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
BEST1O76090 ALDH1A3-203ENST00000557963 1670 ntBASIC24.1■■□□□ 1.45
BEST1O76090 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BEST1O76090 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
BEST1O76090 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
BEST1O76090 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BEST1O76090 AL512631.2-201ENST00000604634 923 ntBASIC24.09■■□□□ 1.45
BEST1O76090 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BEST1O76090 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
BEST1O76090 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
BEST1O76090 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
BEST1O76090 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
BEST1O76090 MIR4466-201ENST00000606121 54 ntBASIC24.08■■□□□ 1.45
BEST1O76090 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.08■■□□□ 1.45
BEST1O76090 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms