Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC10.43□□□□□ -0.74
USH2AO75445 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC10.43□□□□□ -0.74
USH2AO75445 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC10.43□□□□□ -0.74
USH2AO75445 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC10.43□□□□□ -0.74
USH2AO75445 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC10.43□□□□□ -0.74
USH2AO75445 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
USH2AO75445 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
USH2AO75445 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC10.42□□□□□ -0.74
USH2AO75445 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC10.42□□□□□ -0.74
USH2AO75445 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 GAS2L1P2-201ENST00000436355 1356 ntBASIC10.42□□□□□ -0.74
USH2AO75445 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
USH2AO75445 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
USH2AO75445 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC10.42□□□□□ -0.74
USH2AO75445 NT5C3AP1-201ENST00000394500 1012 ntBASIC10.42□□□□□ -0.74
USH2AO75445 KLF13-207ENST00000560473 489 ntTSL 3 BASIC10.42□□□□□ -0.74
USH2AO75445 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 AL358852.1-201ENST00000623174 1268 ntBASIC10.41□□□□□ -0.74
USH2AO75445 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
USH2AO75445 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.41□□□□□ -0.74
USH2AO75445 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC10.41□□□□□ -0.74
USH2AO75445 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
USH2AO75445 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
USH2AO75445 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC10.41□□□□□ -0.74
USH2AO75445 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC10.41□□□□□ -0.74
USH2AO75445 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC10.41□□□□□ -0.74
USH2AO75445 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC10.41□□□□□ -0.74
USH2AO75445 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
USH2AO75445 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC10.41□□□□□ -0.74
USH2AO75445 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
USH2AO75445 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 ABCB10P1-201ENST00000614297 2181 ntBASIC10.4□□□□□ -0.74
USH2AO75445 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC10.4□□□□□ -0.74
USH2AO75445 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC10.4□□□□□ -0.74
USH2AO75445 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
USH2AO75445 WWOX-218ENST00000627394 894 ntTSL 5 BASIC10.4□□□□□ -0.74
USH2AO75445 AC245100.8-202ENST00000629247 1058 ntBASIC10.4□□□□□ -0.74
USH2AO75445 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.4□□□□□ -0.74
USH2AO75445 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.4□□□□□ -0.74
USH2AO75445 APTR-205ENST00000447009 902 ntTSL 2 BASIC10.4□□□□□ -0.74
USH2AO75445 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC10.4□□□□□ -0.74
USH2AO75445 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC10.4□□□□□ -0.74
USH2AO75445 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
USH2AO75445 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
USH2AO75445 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
USH2AO75445 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
USH2AO75445 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
USH2AO75445 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 FOXO3B-201ENST00000395675 1928 ntBASIC10.39□□□□□ -0.75
USH2AO75445 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
USH2AO75445 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC10.39□□□□□ -0.75
USH2AO75445 SNX3-202ENST00000349379 890 ntTSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC10.39□□□□□ -0.75
USH2AO75445 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
USH2AO75445 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
USH2AO75445 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC10.39□□□□□ -0.75
USH2AO75445 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC10.39□□□□□ -0.75
USH2AO75445 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC10.39□□□□□ -0.75
USH2AO75445 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
USH2AO75445 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 AC016769.1-201ENST00000409132 1010 ntBASIC10.38□□□□□ -0.75
USH2AO75445 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC10.38□□□□□ -0.75
USH2AO75445 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC10.38□□□□□ -0.75
USH2AO75445 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC10.38□□□□□ -0.75
USH2AO75445 SMUG1P1-201ENST00000590640 811 ntBASIC10.38□□□□□ -0.75
USH2AO75445 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
USH2AO75445 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms