Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.52■□□□□ 0.87
CCRL2O00421 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCRL2O00421 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.51■□□□□ 0.87
CCRL2O00421 HLA-V-202ENST00000446817 847 ntBASIC20.51■□□□□ 0.87
CCRL2O00421 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.51■□□□□ 0.87
CCRL2O00421 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CCRL2O00421 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCRL2O00421 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCRL2O00421 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCRL2O00421 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCRL2O00421 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCRL2O00421 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.5■□□□□ 0.87
CCRL2O00421 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.5■□□□□ 0.87
CCRL2O00421 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.5■□□□□ 0.87
CCRL2O00421 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.5■□□□□ 0.87
CCRL2O00421 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCRL2O00421 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCRL2O00421 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCRL2O00421 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.49■□□□□ 0.87
CCRL2O00421 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCRL2O00421 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.48■□□□□ 0.87
CCRL2O00421 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCRL2O00421 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.48■□□□□ 0.87
CCRL2O00421 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCRL2O00421 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCRL2O00421 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.48■□□□□ 0.87
CCRL2O00421 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.48■□□□□ 0.87
CCRL2O00421 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCRL2O00421 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
CCRL2O00421 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCRL2O00421 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CCRL2O00421 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.47■□□□□ 0.87
CCRL2O00421 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.47■□□□□ 0.87
CCRL2O00421 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCRL2O00421 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCRL2O00421 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
CCRL2O00421 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCRL2O00421 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCRL2O00421 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCRL2O00421 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCRL2O00421 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCRL2O00421 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCRL2O00421 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.45■□□□□ 0.86
CCRL2O00421 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.45■□□□□ 0.86
CCRL2O00421 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.45■□□□□ 0.86
CCRL2O00421 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.45■□□□□ 0.86
CCRL2O00421 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCRL2O00421 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCRL2O00421 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCRL2O00421 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCRL2O00421 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CCRL2O00421 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.44■□□□□ 0.86
CCRL2O00421 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.44■□□□□ 0.86
CCRL2O00421 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.44■□□□□ 0.86
CCRL2O00421 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCRL2O00421 AC007375.3-201ENST00000600936 2314 ntBASIC20.43■□□□□ 0.86
CCRL2O00421 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCRL2O00421 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.43■□□□□ 0.86
CCRL2O00421 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCRL2O00421 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.43■□□□□ 0.86
CCRL2O00421 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCRL2O00421 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCRL2O00421 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms