Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71LQ8N9Z2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 RP9P-202ENST00000450133 1212 ntBASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 MIR3648-2-201ENST00000581792 180 ntBASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 MIR3648-1-201ENST00000615959 180 ntBASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71LQ8N9Z2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC71LQ8N9Z2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC71LQ8N9Z2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC71LQ8N9Z2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 AC233723.2-201ENST00000623798 2106 ntBASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC71LQ8N9Z2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC71LQ8N9Z2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC71LQ8N9Z2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC71LQ8N9Z2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC71LQ8N9Z2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC71LQ8N9Z2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 ANOS2P-203ENST00000472227 1816 ntBASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 AC093536.1-201ENST00000569153 554 ntBASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 AC092296.2-201ENST00000589470 999 ntBASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19■□□□□ 0.63
CCDC71LQ8N9Z2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC71LQ8N9Z2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms