Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRABD2BA6NFA1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRABD2BA6NFA1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.14■■□□□ 1.14
TRABD2BA6NFA1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.14■■□□□ 1.13
TRABD2BA6NFA1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRABD2BA6NFA1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.14■■□□□ 1.13
TRABD2BA6NFA1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.14■■□□□ 1.13
TRABD2BA6NFA1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TRABD2BA6NFA1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRABD2BA6NFA1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.13■■□□□ 1.13
TRABD2BA6NFA1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
TRABD2BA6NFA1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRABD2BA6NFA1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.12■■□□□ 1.13
TRABD2BA6NFA1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRABD2BA6NFA1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.12■■□□□ 1.13
TRABD2BA6NFA1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.12■■□□□ 1.13
TRABD2BA6NFA1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 IKBKGP1-201ENST00000612193 1073 ntBASIC22.11■■□□□ 1.13
TRABD2BA6NFA1 AC005703.6-201ENST00000623265 1329 ntBASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRABD2BA6NFA1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 AC022517.1-201ENST00000592429 346 ntBASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRABD2BA6NFA1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRABD2BA6NFA1 AC099791.1-201ENST00000416440 715 ntBASIC22.08■■□□□ 1.13
TRABD2BA6NFA1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.08■■□□□ 1.13
TRABD2BA6NFA1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRABD2BA6NFA1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.08■■□□□ 1.13
TRABD2BA6NFA1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
TRABD2BA6NFA1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRABD2BA6NFA1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRABD2BA6NFA1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRABD2BA6NFA1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.06■■□□□ 1.12
TRABD2BA6NFA1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 AC034268.1-201ENST00000441047 882 ntBASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 AC099791.2-201ENST00000605725 427 ntBASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 AL137784.2-201ENST00000607332 1000 ntBASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRABD2BA6NFA1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 AC011298.3-201ENST00000615796 283 ntBASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TRABD2BA6NFA1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.03■■□□□ 1.12
TRABD2BA6NFA1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRABD2BA6NFA1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.03■■□□□ 1.12
TRABD2BA6NFA1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRABD2BA6NFA1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.02■■□□□ 1.12
TRABD2BA6NFA1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRABD2BA6NFA1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.02■■□□□ 1.12
TRABD2BA6NFA1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRABD2BA6NFA1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms