Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.36■■□□□ 1.01
HPF1Q9NWY4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPF1Q9NWY4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPF1Q9NWY4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPF1Q9NWY4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
HPF1Q9NWY4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HPF1Q9NWY4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HPF1Q9NWY4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HPF1Q9NWY4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.34■■□□□ 1.01
HPF1Q9NWY4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HPF1Q9NWY4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HPF1Q9NWY4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.33■■□□□ 1.01
HPF1Q9NWY4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.33■■□□□ 1.01
HPF1Q9NWY4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HPF1Q9NWY4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
HPF1Q9NWY4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.33■■□□□ 1
HPF1Q9NWY4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.33■■□□□ 1
HPF1Q9NWY4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HPF1Q9NWY4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.32■■□□□ 1
HPF1Q9NWY4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPF1Q9NWY4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.32■■□□□ 1
HPF1Q9NWY4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HPF1Q9NWY4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HPF1Q9NWY4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HPF1Q9NWY4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.31■■□□□ 1
HPF1Q9NWY4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.31■■□□□ 1
HPF1Q9NWY4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
HPF1Q9NWY4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HPF1Q9NWY4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.31■■□□□ 1
HPF1Q9NWY4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
HPF1Q9NWY4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.3■■□□□ 1
HPF1Q9NWY4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HPF1Q9NWY4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.3■■□□□ 1
HPF1Q9NWY4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPF1Q9NWY4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPF1Q9NWY4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.3■■□□□ 1
HPF1Q9NWY4 SNX5-217ENST00000606557 1087 ntBASIC21.3■■□□□ 1
HPF1Q9NWY4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.3■■□□□ 1
HPF1Q9NWY4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.3■■□□□ 1
HPF1Q9NWY4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HPF1Q9NWY4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HPF1Q9NWY4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.3■■□□□ 1
HPF1Q9NWY4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HPF1Q9NWY4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.29■■□□□ 1
HPF1Q9NWY4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.29■■□□□ 1
HPF1Q9NWY4 MIR6724-1-201ENST00000616420 92 ntBASIC21.29■■□□□ 1
HPF1Q9NWY4 MIR6724-2-201ENST00000616483 92 ntBASIC21.29■■□□□ 1
HPF1Q9NWY4 MIR6724-4-201ENST00000617390 92 ntBASIC21.29■■□□□ 1
HPF1Q9NWY4 MIR6724-3-201ENST00000622482 92 ntBASIC21.29■■□□□ 1
HPF1Q9NWY4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HPF1Q9NWY4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.29■■□□□ 1
HPF1Q9NWY4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HPF1Q9NWY4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HPF1Q9NWY4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HPF1Q9NWY4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HPF1Q9NWY4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.27■■□□□ 1
HPF1Q9NWY4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.27■■□□□ 1
HPF1Q9NWY4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HPF1Q9NWY4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPF1Q9NWY4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.27■■□□□ 1
HPF1Q9NWY4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPF1Q9NWY4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
HPF1Q9NWY4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HPF1Q9NWY4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.27■□□□□ 0.99
HPF1Q9NWY4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HPF1Q9NWY4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HPF1Q9NWY4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.24■□□□□ 0.99
HPF1Q9NWY4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms