Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BLOC1S4Q9NUP1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.83■■□□□ 1.73
BLOC1S4Q9NUP1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
BLOC1S4Q9NUP1 RARRES2P1-201ENST00000474487 481 ntBASIC25.83■■□□□ 1.73
BLOC1S4Q9NUP1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
BLOC1S4Q9NUP1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.83■■□□□ 1.72
BLOC1S4Q9NUP1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
BLOC1S4Q9NUP1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BLOC1S4Q9NUP1 AC131274.2-201ENST00000580697 1507 ntBASIC25.82■■□□□ 1.72
BLOC1S4Q9NUP1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BLOC1S4Q9NUP1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.81■■□□□ 1.72
BLOC1S4Q9NUP1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
BLOC1S4Q9NUP1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.81■■□□□ 1.72
BLOC1S4Q9NUP1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
BLOC1S4Q9NUP1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
BLOC1S4Q9NUP1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 AL031848.2-201ENST00000607670 837 ntBASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
BLOC1S4Q9NUP1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.79■■□□□ 1.72
BLOC1S4Q9NUP1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BLOC1S4Q9NUP1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 ABCB10P4-201ENST00000566803 2184 ntBASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.77■■□□□ 1.72
BLOC1S4Q9NUP1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
BLOC1S4Q9NUP1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.75■■□□□ 1.71
BLOC1S4Q9NUP1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
BLOC1S4Q9NUP1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
BLOC1S4Q9NUP1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.74■■□□□ 1.71
BLOC1S4Q9NUP1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.74■■□□□ 1.71
BLOC1S4Q9NUP1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.74■■□□□ 1.71
BLOC1S4Q9NUP1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 AC137630.3-201ENST00000607245 391 ntBASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BLOC1S4Q9NUP1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 AL022069.1-201ENST00000568025 1636 ntBASIC25.72■■□□□ 1.71
BLOC1S4Q9NUP1 AL161729.1-201ENST00000604104 1402 ntBASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BLOC1S4Q9NUP1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
BLOC1S4Q9NUP1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
BLOC1S4Q9NUP1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
BLOC1S4Q9NUP1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms