Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF560Q96MR9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 AC004448.1-201ENST00000458332 883 ntBASIC24.81■■□□□ 1.56
ZNF560Q96MR9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF560Q96MR9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 AC131274.2-201ENST00000580697 1507 ntBASIC24.8■■□□□ 1.56
ZNF560Q96MR9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 HLA-L-211ENST00000482052 1765 ntBASIC24.8■■□□□ 1.56
ZNF560Q96MR9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.8■■□□□ 1.56
ZNF560Q96MR9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 MIR6722-201ENST00000617286 78 ntBASIC24.79■■□□□ 1.56
ZNF560Q96MR9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 AL022069.1-201ENST00000568025 1636 ntBASIC24.79■■□□□ 1.56
ZNF560Q96MR9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ZNF560Q96MR9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MIR6724-1-201ENST00000616420 92 ntBASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MIR6724-2-201ENST00000616483 92 ntBASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MIR6724-4-201ENST00000617390 92 ntBASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MIR6724-3-201ENST00000622482 92 ntBASIC24.78■■□□□ 1.56
ZNF560Q96MR9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 AC138932.3-201ENST00000567634 1902 ntBASIC24.78■■□□□ 1.56
ZNF560Q96MR9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.78■■□□□ 1.56
ZNF560Q96MR9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZNF560Q96MR9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
ZNF560Q96MR9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.77■■□□□ 1.56
ZNF560Q96MR9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.77■■□□□ 1.56
ZNF560Q96MR9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZNF560Q96MR9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF560Q96MR9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.75■■□□□ 1.55
ZNF560Q96MR9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF560Q96MR9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF560Q96MR9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZNF560Q96MR9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 AL161729.1-201ENST00000604104 1402 ntBASIC24.74■■□□□ 1.55
ZNF560Q96MR9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZNF560Q96MR9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZNF560Q96MR9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.73■■□□□ 1.55
ZNF560Q96MR9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZNF560Q96MR9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.72■■□□□ 1.55
ZNF560Q96MR9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZNF560Q96MR9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.7■■□□□ 1.54
ZNF560Q96MR9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms