Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
R3HDM4Q96D70 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
R3HDM4Q96D70 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.97■□□□□ 0.63
R3HDM4Q96D70 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
R3HDM4Q96D70 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3HDM4Q96D70 AC004812.2-201ENST00000611079 2094 ntBASIC18.94■□□□□ 0.62
R3HDM4Q96D70 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 KRT18P10-201ENST00000388836 1287 ntBASIC18.94■□□□□ 0.62
R3HDM4Q96D70 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.94■□□□□ 0.62
R3HDM4Q96D70 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3HDM4Q96D70 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
R3HDM4Q96D70 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
R3HDM4Q96D70 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3HDM4Q96D70 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3HDM4Q96D70 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.92■□□□□ 0.62
R3HDM4Q96D70 FOXO3B-201ENST00000395675 1928 ntBASIC18.92■□□□□ 0.62
R3HDM4Q96D70 HLA-L-211ENST00000482052 1765 ntBASIC18.91■□□□□ 0.62
R3HDM4Q96D70 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HDM4Q96D70 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HDM4Q96D70 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.89■□□□□ 0.62
R3HDM4Q96D70 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
R3HDM4Q96D70 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
R3HDM4Q96D70 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms