Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 AC004911.1-201ENST00000416316 871 ntBASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 AC099791.1-201ENST00000416440 715 ntBASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ALMS1Q8TCU4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 AC123595.1-201ENST00000440769 1046 ntBASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 RAP2CP1-201ENST00000605103 478 ntBASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 ESRRAP2-201ENST00000418437 1549 ntBASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
ALMS1Q8TCU4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 AC027612.3-201ENST00000413684 1047 ntBASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 AC099791.2-201ENST00000605725 427 ntBASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.86■□□□□ 0.13
ALMS1Q8TCU4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ALMS1Q8TCU4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ALMS1Q8TCU4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 ABHD17AP1-201ENST00000358206 933 ntBASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 KRT18P61-201ENST00000585825 1298 ntBASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALMS1Q8TCU4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 AC009102.2-201ENST00000606772 1639 ntBASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALMS1Q8TCU4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 AP004609.3-201ENST00000610705 1884 ntBASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALMS1Q8TCU4 AC131274.2-201ENST00000580697 1507 ntBASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ALMS1Q8TCU4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms