Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CSF1P09603 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
CSF1P09603 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.85■□□□□ 0.77
CSF1P09603 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.85■□□□□ 0.77
CSF1P09603 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CSF1P09603 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSF1P09603 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CSF1P09603 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSF1P09603 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSF1P09603 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSF1P09603 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSF1P09603 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.84■□□□□ 0.77
CSF1P09603 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CSF1P09603 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CSF1P09603 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSF1P09603 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSF1P09603 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.83■□□□□ 0.77
CSF1P09603 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSF1P09603 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.83■□□□□ 0.77
CSF1P09603 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CSF1P09603 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSF1P09603 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.83■□□□□ 0.76
CSF1P09603 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSF1P09603 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSF1P09603 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.83■□□□□ 0.76
CSF1P09603 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CSF1P09603 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CSF1P09603 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.82■□□□□ 0.76
CSF1P09603 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSF1P09603 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CSF1P09603 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
CSF1P09603 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
CSF1P09603 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CSF1P09603 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CSF1P09603 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSF1P09603 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CSF1P09603 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSF1P09603 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CSF1P09603 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSF1P09603 AC233723.2-201ENST00000623798 2106 ntBASIC19.8■□□□□ 0.76
CSF1P09603 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CSF1P09603 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CSF1P09603 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CSF1P09603 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
CSF1P09603 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.79■□□□□ 0.76
CSF1P09603 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CSF1P09603 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.79■□□□□ 0.76
CSF1P09603 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CSF1P09603 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CSF1P09603 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CSF1P09603 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.79■□□□□ 0.76
CSF1P09603 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSF1P09603 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.78■□□□□ 0.76
CSF1P09603 AL033527.3-201ENST00000566366 1196 ntBASIC19.78■□□□□ 0.76
CSF1P09603 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSF1P09603 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CSF1P09603 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CSF1P09603 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CSF1P09603 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.77■□□□□ 0.76
CSF1P09603 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSF1P09603 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CSF1P09603 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CSF1P09603 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSF1P09603 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSF1P09603 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.76■□□□□ 0.75
CSF1P09603 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSF1P09603 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.76■□□□□ 0.75
CSF1P09603 HLA-L-211ENST00000482052 1765 ntBASIC19.76■□□□□ 0.75
CSF1P09603 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSF1P09603 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSF1P09603 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSF1P09603 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSF1P09603 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.75■□□□□ 0.75
CSF1P09603 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.75■□□□□ 0.75
CSF1P09603 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSF1P09603 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 777 ms