Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 AC133561.4-201ENST00000566112 224 ntBASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 AC005703.6-201ENST00000623265 1329 ntBASIC23.59■■□□□ 1.37
TBC1D3BA6NDS4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
TBC1D3BA6NDS4 SRD5A1P1-201ENST00000442297 786 ntBASIC23.58■■□□□ 1.37
TBC1D3BA6NDS4 PBX2P1-201ENST00000493219 1291 ntBASIC23.58■■□□□ 1.37
TBC1D3BA6NDS4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TBC1D3BA6NDS4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
TBC1D3BA6NDS4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TBC1D3BA6NDS4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.57■■□□□ 1.36
TBC1D3BA6NDS4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.56■■□□□ 1.36
TBC1D3BA6NDS4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TBC1D3BA6NDS4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.56■■□□□ 1.36
TBC1D3BA6NDS4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
TBC1D3BA6NDS4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 UNC93B3-201ENST00000308076 687 ntBASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 AC091060.1-201ENST00000623524 1766 ntBASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D3BA6NDS4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 AC106739.1-201ENST00000617035 715 ntBASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.54■■□□□ 1.36
TBC1D3BA6NDS4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TBC1D3BA6NDS4 AC145676.1-201ENST00000514988 2004 ntBASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 AC131274.2-201ENST00000580697 1507 ntBASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.52■■□□□ 1.36
TBC1D3BA6NDS4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.51■■□□□ 1.35
TBC1D3BA6NDS4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
TBC1D3BA6NDS4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TBC1D3BA6NDS4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 AL136162.1-201ENST00000607711 1078 ntBASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3BA6NDS4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 MIR6089-201ENST00000616698 64 ntBASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3BA6NDS4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TBC1D3BA6NDS4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D3BA6NDS4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3BA6NDS4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3BA6NDS4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3BA6NDS4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3BA6NDS4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms