Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 AL033527.3-201ENST00000566366 1196 ntBASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV1A0A0A0MS02 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 AC019171.1-201ENST00000601251 1056 ntBASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 AC074183.2-201ENST00000623112 922 ntBASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV1A0A0A0MS02 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 AC022616.5-201ENST00000518796 181 ntBASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 AC010980.1-201ENST00000587192 1142 ntBASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV1A0A0A0MS02 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV1A0A0A0MS02 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV1A0A0A0MS02 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV1A0A0A0MS02 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV1A0A0A0MS02 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRGV1A0A0A0MS02 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV1A0A0A0MS02 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 AC011551.1-201ENST00000614101 683 ntBASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRGV1A0A0A0MS02 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV1A0A0A0MS02 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms