Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC35.9■■■■□ 3.34
COL17A1Q9UMD9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
COL17A1Q9UMD9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
COL17A1Q9UMD9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
COL17A1Q9UMD9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.88■■■■□ 3.33
COL17A1Q9UMD9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC35.88■■■■□ 3.33
COL17A1Q9UMD9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 YBX1P1-201ENST00000445822 960 ntBASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC35.87■■■■□ 3.33
COL17A1Q9UMD9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
COL17A1Q9UMD9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC35.85■■■■□ 3.33
COL17A1Q9UMD9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
COL17A1Q9UMD9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
COL17A1Q9UMD9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.85■■■■□ 3.33
COL17A1Q9UMD9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
COL17A1Q9UMD9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC35.83■■■■□ 3.33
COL17A1Q9UMD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
COL17A1Q9UMD9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
COL17A1Q9UMD9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
COL17A1Q9UMD9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
COL17A1Q9UMD9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
COL17A1Q9UMD9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC35.81■■■■□ 3.32
COL17A1Q9UMD9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
COL17A1Q9UMD9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
COL17A1Q9UMD9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC35.8■■■■□ 3.32
COL17A1Q9UMD9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
COL17A1Q9UMD9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC35.79■■■■□ 3.32
COL17A1Q9UMD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC35.79■■■■□ 3.32
COL17A1Q9UMD9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 AL138724.1-201ENST00000606771 1088 ntBASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 AC092171.4-201ENST00000609130 632 ntBASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
COL17A1Q9UMD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.77■■■■□ 3.32
COL17A1Q9UMD9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC35.76■■■■□ 3.32
COL17A1Q9UMD9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
COL17A1Q9UMD9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC35.76■■■■□ 3.32
COL17A1Q9UMD9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC35.76■■■■□ 3.32
COL17A1Q9UMD9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC35.75■■■■□ 3.31
COL17A1Q9UMD9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
COL17A1Q9UMD9 AC099791.2-201ENST00000605725 427 ntBASIC35.75■■■■□ 3.31
COL17A1Q9UMD9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
COL17A1Q9UMD9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC35.74■■■■□ 3.31
COL17A1Q9UMD9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC35.74■■■■□ 3.31
COL17A1Q9UMD9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC35.73■■■■□ 3.31
COL17A1Q9UMD9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.73■■■■□ 3.31
COL17A1Q9UMD9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
COL17A1Q9UMD9 LBH-205ENST00000407930 756 ntTSL 2 BASIC35.73■■■■□ 3.31
COL17A1Q9UMD9 MPST-208ENST00000628507 698 ntTSL 5 BASIC35.73■■■■□ 3.31
COL17A1Q9UMD9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
COL17A1Q9UMD9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
COL17A1Q9UMD9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.71■■■■□ 3.31
COL17A1Q9UMD9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.7■■■■□ 3.31
COL17A1Q9UMD9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
COL17A1Q9UMD9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC35.7■■■■□ 3.31
COL17A1Q9UMD9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.7■■■■□ 3.31
COL17A1Q9UMD9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC35.7■■■■□ 3.31
COL17A1Q9UMD9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC35.69■■■■□ 3.3
COL17A1Q9UMD9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC35.69■■■■□ 3.3
COL17A1Q9UMD9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC35.69■■■■□ 3.3
COL17A1Q9UMD9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC35.69■■■■□ 3.3
COL17A1Q9UMD9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
COL17A1Q9UMD9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC35.68■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms