Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC097381.1-201ENST00000429019 1296 ntBASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 AC087623.3-201ENST00000607047 1098 ntBASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LINC00116Q8NCU8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 AC096887.2-201ENST00000623443 1957 ntBASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 MIR4767-201ENST00000582827 78 ntBASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.88■■■□□ 2.37
LINC00116Q8NCU8 AC142086.6-201ENST00000621154 1765 ntBASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 AC091305.1-201ENST00000479476 895 ntBASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.87■■■□□ 2.37
LINC00116Q8NCU8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
LINC00116Q8NCU8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LINC00116Q8NCU8 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.86■■■□□ 2.37
LINC00116Q8NCU8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.86■■■□□ 2.37
LINC00116Q8NCU8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 DUX4L19-201ENST00000557448 1267 ntBASIC29.85■■■□□ 2.37
LINC00116Q8NCU8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.84■■■□□ 2.37
LINC00116Q8NCU8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.84■■■□□ 2.37
LINC00116Q8NCU8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LINC00116Q8NCU8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
LINC00116Q8NCU8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.83■■■□□ 2.37
LINC00116Q8NCU8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LINC00116Q8NCU8 AL162430.1-201ENST00000480705 870 ntBASIC29.83■■■□□ 2.37
LINC00116Q8NCU8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.83■■■□□ 2.37
LINC00116Q8NCU8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 SYT6-210ENST00000641643 1587 ntBASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 CA15P2-201ENST00000611168 834 ntBASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
LINC00116Q8NCU8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 AC097639.1-201ENST00000565519 1891 ntBASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 SERBP1P1-201ENST00000396021 1160 ntBASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LINC00116Q8NCU8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 AC005703.6-201ENST00000623265 1329 ntBASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 ERN1-208ENST00000606895 2068 ntBASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
LINC00116Q8NCU8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
LINC00116Q8NCU8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.78■■■□□ 2.36
LINC00116Q8NCU8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 RASA4CP-201ENST00000424092 1398 ntBASIC29.77■■■□□ 2.36
LINC00116Q8NCU8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.76■■■□□ 2.35
LINC00116Q8NCU8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
LINC00116Q8NCU8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
LINC00116Q8NCU8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LINC00116Q8NCU8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LINC00116Q8NCU8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
LINC00116Q8NCU8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LINC00116Q8NCU8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.75■■■□□ 2.35
LINC00116Q8NCU8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
LINC00116Q8NCU8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
LINC00116Q8NCU8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms