Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MIR6722-201ENST00000617286 78 ntBASIC32.71■■■□□ 2.83
ARHGEF28Q8N1W1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ARHGEF28Q8N1W1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
ARHGEF28Q8N1W1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ARHGEF28Q8N1W1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC32.69■■■□□ 2.82
ARHGEF28Q8N1W1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
ARHGEF28Q8N1W1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.68■■■□□ 2.82
ARHGEF28Q8N1W1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.68■■■□□ 2.82
ARHGEF28Q8N1W1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ARHGEF28Q8N1W1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
ARHGEF28Q8N1W1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
ARHGEF28Q8N1W1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.67■■■□□ 2.82
ARHGEF28Q8N1W1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
ARHGEF28Q8N1W1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
ARHGEF28Q8N1W1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ARHGEF28Q8N1W1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ARHGEF28Q8N1W1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARHGEF28Q8N1W1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ARHGEF28Q8N1W1 AC004448.1-201ENST00000458332 883 ntBASIC32.64■■■□□ 2.82
ARHGEF28Q8N1W1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ARHGEF28Q8N1W1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
ARHGEF28Q8N1W1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
ARHGEF28Q8N1W1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ARHGEF28Q8N1W1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
ARHGEF28Q8N1W1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC32.62■■■□□ 2.81
ARHGEF28Q8N1W1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ARHGEF28Q8N1W1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC32.62■■■□□ 2.81
ARHGEF28Q8N1W1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC32.62■■■□□ 2.81
ARHGEF28Q8N1W1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ARHGEF28Q8N1W1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ARHGEF28Q8N1W1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ARHGEF28Q8N1W1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.61■■■□□ 2.81
ARHGEF28Q8N1W1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC32.61■■■□□ 2.81
ARHGEF28Q8N1W1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ARHGEF28Q8N1W1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ARHGEF28Q8N1W1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
ARHGEF28Q8N1W1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ARHGEF28Q8N1W1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC32.59■■■□□ 2.81
ARHGEF28Q8N1W1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 SLC6A10P-202ENST00000431994 2058 ntBASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ARHGEF28Q8N1W1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.57■■■□□ 2.8
ARHGEF28Q8N1W1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ARHGEF28Q8N1W1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
ARHGEF28Q8N1W1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
ARHGEF28Q8N1W1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.57■■■□□ 2.8
ARHGEF28Q8N1W1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ARHGEF28Q8N1W1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ARHGEF28Q8N1W1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.56■■■□□ 2.8
ARHGEF28Q8N1W1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ARHGEF28Q8N1W1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ARHGEF28Q8N1W1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
ARHGEF28Q8N1W1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.55■■■□□ 2.8
ARHGEF28Q8N1W1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 MIR935-201ENST00000401179 91 ntBASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC32.54■■■□□ 2.8
ARHGEF28Q8N1W1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC32.53■■■□□ 2.8
ARHGEF28Q8N1W1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC32.53■■■□□ 2.8
ARHGEF28Q8N1W1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
ARHGEF28Q8N1W1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ARHGEF28Q8N1W1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ARHGEF28Q8N1W1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ARHGEF28Q8N1W1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ARHGEF28Q8N1W1 AL031432.3-201ENST00000607698 485 ntBASIC32.51■■■□□ 2.8
ARHGEF28Q8N1W1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ARHGEF28Q8N1W1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC32.51■■■□□ 2.8
ARHGEF28Q8N1W1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ARHGEF28Q8N1W1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC32.51■■■□□ 2.79
ARHGEF28Q8N1W1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC32.51■■■□□ 2.79
ARHGEF28Q8N1W1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC32.51■■■□□ 2.79
ARHGEF28Q8N1W1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ARHGEF28Q8N1W1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
ARHGEF28Q8N1W1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms