Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.8■□□□□ 0.92
VBP1P61758 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VBP1P61758 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VBP1P61758 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.8■□□□□ 0.92
VBP1P61758 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.8■□□□□ 0.92
VBP1P61758 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.8■□□□□ 0.92
VBP1P61758 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.8■□□□□ 0.92
VBP1P61758 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VBP1P61758 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.79■□□□□ 0.92
VBP1P61758 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 AC137767.1-201ENST00000602918 1920 ntBASIC20.79■□□□□ 0.92
VBP1P61758 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VBP1P61758 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.79■□□□□ 0.92
VBP1P61758 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VBP1P61758 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VBP1P61758 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VBP1P61758 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VBP1P61758 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.78■□□□□ 0.92
VBP1P61758 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
VBP1P61758 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VBP1P61758 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
VBP1P61758 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.77■□□□□ 0.92
VBP1P61758 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.77■□□□□ 0.92
VBP1P61758 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VBP1P61758 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VBP1P61758 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VBP1P61758 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VBP1P61758 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VBP1P61758 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VBP1P61758 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VBP1P61758 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VBP1P61758 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VBP1P61758 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VBP1P61758 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VBP1P61758 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VBP1P61758 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VBP1P61758 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.76■□□□□ 0.91
VBP1P61758 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.75■□□□□ 0.91
VBP1P61758 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
VBP1P61758 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.75■□□□□ 0.91
VBP1P61758 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.75■□□□□ 0.91
VBP1P61758 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.75■□□□□ 0.91
VBP1P61758 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VBP1P61758 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VBP1P61758 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.74■□□□□ 0.91
VBP1P61758 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VBP1P61758 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
VBP1P61758 GUSBP5-202ENST00000510805 1989 ntBASIC20.74■□□□□ 0.91
VBP1P61758 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VBP1P61758 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VBP1P61758 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.74■□□□□ 0.91
VBP1P61758 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.74■□□□□ 0.91
VBP1P61758 AL359504.2-201ENST00000605506 1601 ntBASIC20.74■□□□□ 0.91
VBP1P61758 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.74■□□□□ 0.91
VBP1P61758 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VBP1P61758 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VBP1P61758 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VBP1P61758 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 AC127496.7-201ENST00000625110 1798 ntBASIC20.73■□□□□ 0.91
VBP1P61758 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 AC097358.2-201ENST00000607541 1159 ntBASIC20.73■□□□□ 0.91
VBP1P61758 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VBP1P61758 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VBP1P61758 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VBP1P61758 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.73■□□□□ 0.91
VBP1P61758 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VBP1P61758 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VBP1P61758 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VBP1P61758 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VBP1P61758 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VBP1P61758 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.72■□□□□ 0.91
VBP1P61758 MIR6089-201ENST00000616698 64 ntBASIC20.72■□□□□ 0.91
VBP1P61758 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VBP1P61758 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VBP1P61758 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VBP1P61758 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VBP1P61758 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.71■□□□□ 0.91
VBP1P61758 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VBP1P61758 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VBP1P61758 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms