Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
COL15A1P39059 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL15A1P39059 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL15A1P39059 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
COL15A1P39059 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL15A1P39059 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL15A1P39059 AC142381.2-201ENST00000566120 298 ntBASIC29.8■■■□□ 2.36
COL15A1P39059 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
COL15A1P39059 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL15A1P39059 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL15A1P39059 UNC93B3-201ENST00000308076 687 ntBASIC29.79■■■□□ 2.36
COL15A1P39059 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL15A1P39059 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL15A1P39059 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.79■■■□□ 2.36
COL15A1P39059 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
COL15A1P39059 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
COL15A1P39059 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.79■■■□□ 2.36
COL15A1P39059 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.79■■■□□ 2.36
COL15A1P39059 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL15A1P39059 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL15A1P39059 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL15A1P39059 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
COL15A1P39059 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
COL15A1P39059 AL136162.1-201ENST00000607711 1078 ntBASIC29.77■■■□□ 2.36
COL15A1P39059 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL15A1P39059 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.77■■■□□ 2.36
COL15A1P39059 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.77■■■□□ 2.36
COL15A1P39059 SUDS3P1-201ENST00000505831 966 ntBASIC29.77■■■□□ 2.36
COL15A1P39059 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
COL15A1P39059 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.77■■■□□ 2.36
COL15A1P39059 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.76■■■□□ 2.36
COL15A1P39059 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL15A1P39059 DUSP8P4-201ENST00000399538 1761 ntBASIC29.76■■■□□ 2.35
COL15A1P39059 AC135279.3-201ENST00000610945 1311 ntBASIC29.76■■■□□ 2.35
COL15A1P39059 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL15A1P39059 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL15A1P39059 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.76■■■□□ 2.35
COL15A1P39059 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.76■■■□□ 2.35
COL15A1P39059 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.76■■■□□ 2.35
COL15A1P39059 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL15A1P39059 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL15A1P39059 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL15A1P39059 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL15A1P39059 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
COL15A1P39059 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL15A1P39059 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.74■■■□□ 2.35
COL15A1P39059 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
COL15A1P39059 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
COL15A1P39059 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
COL15A1P39059 AC097639.1-201ENST00000565519 1891 ntBASIC29.72■■■□□ 2.35
COL15A1P39059 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL15A1P39059 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL15A1P39059 SRD5A1P1-201ENST00000442297 786 ntBASIC29.72■■■□□ 2.35
COL15A1P39059 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.72■■■□□ 2.35
COL15A1P39059 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.72■■■□□ 2.35
COL15A1P39059 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
COL15A1P39059 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
COL15A1P39059 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.71■■■□□ 2.35
COL15A1P39059 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL15A1P39059 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
COL15A1P39059 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
COL15A1P39059 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
COL15A1P39059 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.7■■■□□ 2.35
COL15A1P39059 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.7■■■□□ 2.35
COL15A1P39059 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.7■■■□□ 2.35
COL15A1P39059 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.7■■■□□ 2.35
COL15A1P39059 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
COL15A1P39059 AC024257.2-201ENST00000549699 147 ntBASIC29.7■■■□□ 2.35
COL15A1P39059 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
COL15A1P39059 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.69■■■□□ 2.34
COL15A1P39059 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
COL15A1P39059 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL15A1P39059 AC026271.2-201ENST00000428091 497 ntBASIC29.69■■■□□ 2.34
COL15A1P39059 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.69■■■□□ 2.34
COL15A1P39059 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC29.69■■■□□ 2.34
COL15A1P39059 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.69■■■□□ 2.34
COL15A1P39059 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL15A1P39059 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL15A1P39059 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL15A1P39059 AC091060.1-201ENST00000623524 1766 ntBASIC29.68■■■□□ 2.34
COL15A1P39059 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
COL15A1P39059 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL15A1P39059 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL15A1P39059 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL15A1P39059 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
COL15A1P39059 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.67■■■□□ 2.34
COL15A1P39059 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.67■■■□□ 2.34
COL15A1P39059 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL15A1P39059 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.67■■■□□ 2.34
COL15A1P39059 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.67■■■□□ 2.34
COL15A1P39059 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.66■■■□□ 2.34
COL15A1P39059 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL15A1P39059 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL15A1P39059 EDA-201ENST00000338901 1233 ntBASIC29.66■■■□□ 2.34
COL15A1P39059 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.66■■■□□ 2.34
COL15A1P39059 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
COL15A1P39059 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
COL15A1P39059 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.66■■■□□ 2.34
COL15A1P39059 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.66■■■□□ 2.34
COL15A1P39059 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms