Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
USP6P35125 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP6P35125 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.85■■■□□ 2.69
USP6P35125 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP6P35125 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
USP6P35125 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
USP6P35125 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
USP6P35125 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP6P35125 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.84■■■□□ 2.69
USP6P35125 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
USP6P35125 ZNRF2P3-201ENST00000424200 374 ntBASIC31.83■■■□□ 2.69
USP6P35125 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USP6P35125 PBX2P1-201ENST00000493219 1291 ntBASIC31.83■■■□□ 2.69
USP6P35125 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.83■■■□□ 2.69
USP6P35125 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
USP6P35125 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USP6P35125 AC092803.2-201ENST00000564287 1899 ntBASIC31.83■■■□□ 2.69
USP6P35125 UNC93B3-201ENST00000308076 687 ntBASIC31.83■■■□□ 2.69
USP6P35125 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
USP6P35125 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USP6P35125 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
USP6P35125 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
USP6P35125 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
USP6P35125 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
USP6P35125 SUDS3P1-201ENST00000505831 966 ntBASIC31.82■■■□□ 2.68
USP6P35125 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.82■■■□□ 2.68
USP6P35125 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
USP6P35125 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 AL136162.1-201ENST00000607711 1078 ntBASIC31.81■■■□□ 2.68
USP6P35125 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP6P35125 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
USP6P35125 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.8■■■□□ 2.68
USP6P35125 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.8■■■□□ 2.68
USP6P35125 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
USP6P35125 SRD5A1P1-201ENST00000442297 786 ntBASIC31.8■■■□□ 2.68
USP6P35125 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP6P35125 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP6P35125 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
USP6P35125 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
USP6P35125 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.79■■■□□ 2.68
USP6P35125 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.79■■■□□ 2.68
USP6P35125 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
USP6P35125 AC135279.3-201ENST00000610945 1311 ntBASIC31.79■■■□□ 2.68
USP6P35125 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.79■■■□□ 2.68
USP6P35125 AC131274.2-201ENST00000580697 1507 ntBASIC31.79■■■□□ 2.68
USP6P35125 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
USP6P35125 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
USP6P35125 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
USP6P35125 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
USP6P35125 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.78■■■□□ 2.68
USP6P35125 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
USP6P35125 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
USP6P35125 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
USP6P35125 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
USP6P35125 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.76■■■□□ 2.68
USP6P35125 AC142381.2-201ENST00000566120 298 ntBASIC31.76■■■□□ 2.68
USP6P35125 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.76■■■□□ 2.68
USP6P35125 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
USP6P35125 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
USP6P35125 AC024257.2-201ENST00000549699 147 ntBASIC31.75■■■□□ 2.67
USP6P35125 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
USP6P35125 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.75■■■□□ 2.67
USP6P35125 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.75■■■□□ 2.67
USP6P35125 AL121749.1-202ENST00000609313 2153 ntBASIC31.74■■■□□ 2.67
USP6P35125 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
USP6P35125 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
USP6P35125 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.74■■■□□ 2.67
USP6P35125 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.74■■■□□ 2.67
USP6P35125 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.74■■■□□ 2.67
USP6P35125 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
USP6P35125 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.73■■■□□ 2.67
USP6P35125 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
USP6P35125 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
USP6P35125 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
USP6P35125 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
USP6P35125 RARRES2P6-201ENST00000567333 442 ntBASIC31.72■■■□□ 2.67
USP6P35125 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
USP6P35125 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
USP6P35125 AC005703.6-201ENST00000623265 1329 ntBASIC31.71■■■□□ 2.67
USP6P35125 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
USP6P35125 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
USP6P35125 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.71■■■□□ 2.67
USP6P35125 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.71■■■□□ 2.67
USP6P35125 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
USP6P35125 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
USP6P35125 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.7■■■□□ 2.67
USP6P35125 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
USP6P35125 EDA-201ENST00000338901 1233 ntBASIC31.7■■■□□ 2.67
USP6P35125 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms