Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
LTN1O94822 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
LTN1O94822 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.32■■■□□ 2.6
LTN1O94822 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTN1O94822 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
LTN1O94822 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.31■■■□□ 2.6
LTN1O94822 AC092803.2-201ENST00000564287 1899 ntBASIC31.3■■■□□ 2.6
LTN1O94822 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.3■■■□□ 2.6
LTN1O94822 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LTN1O94822 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LTN1O94822 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.29■■■□□ 2.6
LTN1O94822 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
LTN1O94822 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
LTN1O94822 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.29■■■□□ 2.6
LTN1O94822 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.28■■■□□ 2.6
LTN1O94822 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LTN1O94822 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
LTN1O94822 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.28■■■□□ 2.6
LTN1O94822 AC135279.3-201ENST00000610945 1311 ntBASIC31.28■■■□□ 2.6
LTN1O94822 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LTN1O94822 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
LTN1O94822 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.28■■■□□ 2.6
LTN1O94822 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.28■■■□□ 2.6
LTN1O94822 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.28■■■□□ 2.6
LTN1O94822 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.28■■■□□ 2.6
LTN1O94822 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.28■■■□□ 2.6
LTN1O94822 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.28■■■□□ 2.6
LTN1O94822 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.27■■■□□ 2.6
LTN1O94822 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LTN1O94822 AC004448.1-201ENST00000458332 883 ntBASIC31.27■■■□□ 2.6
LTN1O94822 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.27■■■□□ 2.6
LTN1O94822 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.27■■■□□ 2.6
LTN1O94822 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
LTN1O94822 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
LTN1O94822 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
LTN1O94822 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
LTN1O94822 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.26■■■□□ 2.6
LTN1O94822 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
LTN1O94822 PBX2P1-201ENST00000493219 1291 ntBASIC31.26■■■□□ 2.59
LTN1O94822 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.26■■■□□ 2.59
LTN1O94822 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
LTN1O94822 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LTN1O94822 UNC93B3-201ENST00000308076 687 ntBASIC31.25■■■□□ 2.59
LTN1O94822 AC024257.2-201ENST00000549699 147 ntBASIC31.25■■■□□ 2.59
LTN1O94822 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.25■■■□□ 2.59
LTN1O94822 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.25■■■□□ 2.59
LTN1O94822 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LTN1O94822 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
LTN1O94822 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
LTN1O94822 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.25■■■□□ 2.59
LTN1O94822 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTN1O94822 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.24■■■□□ 2.59
LTN1O94822 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTN1O94822 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
LTN1O94822 AL136162.1-201ENST00000607711 1078 ntBASIC31.24■■■□□ 2.59
LTN1O94822 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTN1O94822 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.23■■■□□ 2.59
LTN1O94822 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTN1O94822 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTN1O94822 AC026271.2-201ENST00000428091 497 ntBASIC31.22■■■□□ 2.59
LTN1O94822 AC142381.2-201ENST00000566120 298 ntBASIC31.22■■■□□ 2.59
LTN1O94822 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.22■■■□□ 2.59
LTN1O94822 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LTN1O94822 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.22■■■□□ 2.59
LTN1O94822 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.22■■■□□ 2.59
LTN1O94822 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
LTN1O94822 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
LTN1O94822 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.21■■■□□ 2.59
LTN1O94822 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LTN1O94822 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.21■■■□□ 2.59
LTN1O94822 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
LTN1O94822 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LTN1O94822 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTN1O94822 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LTN1O94822 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.2■■■□□ 2.59
LTN1O94822 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
LTN1O94822 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTN1O94822 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LTN1O94822 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTN1O94822 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
LTN1O94822 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
LTN1O94822 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.2■■■□□ 2.58
LTN1O94822 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.2■■■□□ 2.58
LTN1O94822 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
LTN1O94822 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTN1O94822 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.18■■■□□ 2.58
LTN1O94822 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.18■■■□□ 2.58
LTN1O94822 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.18■■■□□ 2.58
LTN1O94822 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.18■■■□□ 2.58
LTN1O94822 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
LTN1O94822 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
LTN1O94822 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.17■■■□□ 2.58
LTN1O94822 AP001330.3-201ENST00000520123 633 ntBASIC31.17■■■□□ 2.58
LTN1O94822 MIR6089-201ENST00000616698 64 ntBASIC31.17■■■□□ 2.58
LTN1O94822 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.17■■■□□ 2.58
LTN1O94822 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
LTN1O94822 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LTN1O94822 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
LTN1O94822 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.16■■■□□ 2.58
LTN1O94822 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms