Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIMC1Q8NDZ2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.93■■□□□ 1.1
SIMC1Q8NDZ2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIMC1Q8NDZ2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIMC1Q8NDZ2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIMC1Q8NDZ2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SIMC1Q8NDZ2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SIMC1Q8NDZ2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 AL139125.2-201ENST00000623134 1869 ntBASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 MIR6089-201ENST00000616698 64 ntBASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.88■■□□□ 1.09
SIMC1Q8NDZ2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 AC019171.1-201ENST00000601251 1056 ntBASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.87■■□□□ 1.09
SIMC1Q8NDZ2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
SIMC1Q8NDZ2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SIMC1Q8NDZ2 AL592295.1-201ENST00000400984 884 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms