Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC35.28■■■■□ 3.24
ABCA6Q8N139 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA6Q8N139 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA6Q8N139 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC35.27■■■■□ 3.24
ABCA6Q8N139 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC35.27■■■■□ 3.24
ABCA6Q8N139 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
ABCA6Q8N139 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
ABCA6Q8N139 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.27■■■■□ 3.24
ABCA6Q8N139 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC35.27■■■■□ 3.24
ABCA6Q8N139 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC35.27■■■■□ 3.24
ABCA6Q8N139 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
ABCA6Q8N139 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.23
ABCA6Q8N139 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
ABCA6Q8N139 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.25■■■■□ 3.23
ABCA6Q8N139 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
ABCA6Q8N139 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC35.25■■■■□ 3.23
ABCA6Q8N139 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
ABCA6Q8N139 AC091305.1-201ENST00000479476 895 ntBASIC35.24■■■■□ 3.23
ABCA6Q8N139 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC35.24■■■■□ 3.23
ABCA6Q8N139 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA6Q8N139 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC35.23■■■■□ 3.23
ABCA6Q8N139 PARL-206ENST00000435888 1098 ntTSL 5 BASIC35.23■■■■□ 3.23
ABCA6Q8N139 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA6Q8N139 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA6Q8N139 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA6Q8N139 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC35.23■■■■□ 3.23
ABCA6Q8N139 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
ABCA6Q8N139 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC35.22■■■■□ 3.23
ABCA6Q8N139 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.22■■■■□ 3.23
ABCA6Q8N139 MIR4767-201ENST00000582827 78 ntBASIC35.22■■■■□ 3.23
ABCA6Q8N139 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
ABCA6Q8N139 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
ABCA6Q8N139 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
ABCA6Q8N139 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.21■■■■□ 3.23
ABCA6Q8N139 AC090877.2-201ENST00000558441 1738 ntBASIC35.21■■■■□ 3.23
ABCA6Q8N139 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
ABCA6Q8N139 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
ABCA6Q8N139 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.2■■■■□ 3.23
ABCA6Q8N139 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.19■■■■□ 3.22
ABCA6Q8N139 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC35.19■■■■□ 3.22
ABCA6Q8N139 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC35.19■■■■□ 3.22
ABCA6Q8N139 LBH-205ENST00000407930 756 ntTSL 2 BASIC35.18■■■■□ 3.22
ABCA6Q8N139 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
ABCA6Q8N139 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
ABCA6Q8N139 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC35.18■■■■□ 3.22
ABCA6Q8N139 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA6Q8N139 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.17■■■■□ 3.22
ABCA6Q8N139 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA6Q8N139 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ABCA6Q8N139 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC35.17■■■■□ 3.22
ABCA6Q8N139 CA15P2-201ENST00000611168 834 ntBASIC35.17■■■■□ 3.22
ABCA6Q8N139 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
ABCA6Q8N139 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
ABCA6Q8N139 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA6Q8N139 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC35.15■■■■□ 3.22
ABCA6Q8N139 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA6Q8N139 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA6Q8N139 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
ABCA6Q8N139 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.15■■■■□ 3.22
ABCA6Q8N139 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA6Q8N139 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA6Q8N139 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC35.14■■■■□ 3.22
ABCA6Q8N139 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC35.14■■■■□ 3.22
ABCA6Q8N139 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ABCA6Q8N139 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ABCA6Q8N139 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ABCA6Q8N139 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC35.13■■■■□ 3.21
ABCA6Q8N139 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC35.13■■■■□ 3.21
ABCA6Q8N139 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA6Q8N139 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA6Q8N139 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA6Q8N139 AC027682.1-201ENST00000562846 899 ntBASIC35.12■■■■□ 3.21
ABCA6Q8N139 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
ABCA6Q8N139 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC35.11■■■■□ 3.21
ABCA6Q8N139 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ABCA6Q8N139 PTCHD3P2-201ENST00000424937 1205 ntBASIC35.11■■■■□ 3.21
ABCA6Q8N139 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC35.11■■■■□ 3.21
ABCA6Q8N139 DUX4L19-201ENST00000557448 1267 ntBASIC35.11■■■■□ 3.21
ABCA6Q8N139 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA6Q8N139 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
ABCA6Q8N139 RASA4CP-201ENST00000424092 1398 ntBASIC35.09■■■■□ 3.21
ABCA6Q8N139 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
ABCA6Q8N139 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
ABCA6Q8N139 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
ABCA6Q8N139 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
ABCA6Q8N139 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
ABCA6Q8N139 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.09■■■■□ 3.21
ABCA6Q8N139 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC35.09■■■■□ 3.21
ABCA6Q8N139 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.21
ABCA6Q8N139 SERBP1P1-201ENST00000396021 1160 ntBASIC35.07■■■■□ 3.21
ABCA6Q8N139 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
ABCA6Q8N139 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
ABCA6Q8N139 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ABCA6Q8N139 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ABCA6Q8N139 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
ABCA6Q8N139 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC35.06■■■■□ 3.2
ABCA6Q8N139 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms