Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.01■□□□□ 0.95
ZNF404Q494X3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF404Q494X3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF404Q494X3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF404Q494X3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF404Q494X3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZNF404Q494X3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF404Q494X3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21■□□□□ 0.95
ZNF404Q494X3 AC004812.2-201ENST00000611079 2094 ntBASIC21■□□□□ 0.95
ZNF404Q494X3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF404Q494X3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF404Q494X3 LINC00565-201ENST00000562710 2331 ntBASIC20.99■□□□□ 0.95
ZNF404Q494X3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF404Q494X3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF404Q494X3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.99■□□□□ 0.95
ZNF404Q494X3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF404Q494X3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZNF404Q494X3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZNF404Q494X3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF404Q494X3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF404Q494X3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF404Q494X3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF404Q494X3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.97■□□□□ 0.95
ZNF404Q494X3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF404Q494X3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF404Q494X3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF404Q494X3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF404Q494X3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF404Q494X3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF404Q494X3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF404Q494X3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.95■□□□□ 0.95
ZNF404Q494X3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.95■□□□□ 0.95
ZNF404Q494X3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF404Q494X3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF404Q494X3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF404Q494X3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF404Q494X3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF404Q494X3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF404Q494X3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF404Q494X3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF404Q494X3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
ZNF404Q494X3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZNF404Q494X3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF404Q494X3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF404Q494X3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF404Q494X3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZNF404Q494X3 EP400NL-214ENST00000641289 2402 ntBASIC20.94■□□□□ 0.94
ZNF404Q494X3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZNF404Q494X3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.93■□□□□ 0.94
ZNF404Q494X3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF404Q494X3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF404Q494X3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ZNF404Q494X3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF404Q494X3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF404Q494X3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ZNF404Q494X3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF404Q494X3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF404Q494X3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF404Q494X3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.92■□□□□ 0.94
ZNF404Q494X3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF404Q494X3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF404Q494X3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF404Q494X3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF404Q494X3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms