Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VMA21Q3ZAQ7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VMA21Q3ZAQ7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VMA21Q3ZAQ7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VMA21Q3ZAQ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 LINC00543-201ENST00000567234 1845 ntBASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 U85056.1-201ENST00000616429 682 ntBASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VMA21Q3ZAQ7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
VMA21Q3ZAQ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 AC087393.1-201ENST00000582896 145 ntBASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VMA21Q3ZAQ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 ABHD17AP5-201ENST00000580133 923 ntBASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VMA21Q3ZAQ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 AL592295.1-201ENST00000400984 884 ntBASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VMA21Q3ZAQ7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 AC129492.7-201ENST00000622992 756 ntBASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VMA21Q3ZAQ7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VMA21Q3ZAQ7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VMA21Q3ZAQ7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 KRT18P60-201ENST00000312876 1297 ntBASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.7■□□□□ 0.58
VMA21Q3ZAQ7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 HLA-L-211ENST00000482052 1765 ntBASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 NTF6A-201ENST00000591175 560 ntBASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VMA21Q3ZAQ7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.68■□□□□ 0.58
VMA21Q3ZAQ7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms