Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCN2P80188 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.52■□□□□ 0.72
LCN2P80188 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCN2P80188 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
LCN2P80188 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.52■□□□□ 0.71
LCN2P80188 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.52■□□□□ 0.71
LCN2P80188 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 AC011551.1-201ENST00000614101 683 ntBASIC19.51■□□□□ 0.71
LCN2P80188 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.51■□□□□ 0.71
LCN2P80188 AC092803.2-201ENST00000564287 1899 ntBASIC19.51■□□□□ 0.71
LCN2P80188 AC097639.1-201ENST00000565519 1891 ntBASIC19.51■□□□□ 0.71
LCN2P80188 AC010501.1-201ENST00000606270 1962 ntBASIC19.51■□□□□ 0.71
LCN2P80188 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LCN2P80188 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCN2P80188 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LCN2P80188 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCN2P80188 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LCN2P80188 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.5■□□□□ 0.71
LCN2P80188 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LCN2P80188 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LCN2P80188 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
LCN2P80188 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LCN2P80188 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.49■□□□□ 0.71
LCN2P80188 AC021242.3-201ENST00000607598 1377 ntBASIC19.49■□□□□ 0.71
LCN2P80188 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.49■□□□□ 0.71
LCN2P80188 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 UNC93B8-201ENST00000511903 705 ntBASIC19.49■□□□□ 0.71
LCN2P80188 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.49■□□□□ 0.71
LCN2P80188 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCN2P80188 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LCN2P80188 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCN2P80188 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.48■□□□□ 0.71
LCN2P80188 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.48■□□□□ 0.71
LCN2P80188 KRT16P3-201ENST00000439127 1283 ntBASIC19.48■□□□□ 0.71
LCN2P80188 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCN2P80188 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCN2P80188 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCN2P80188 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LCN2P80188 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.47■□□□□ 0.71
LCN2P80188 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LCN2P80188 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.47■□□□□ 0.71
LCN2P80188 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.47■□□□□ 0.71
LCN2P80188 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.47■□□□□ 0.71
LCN2P80188 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.47■□□□□ 0.71
LCN2P80188 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.47■□□□□ 0.71
LCN2P80188 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.47■□□□□ 0.71
LCN2P80188 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.47■□□□□ 0.71
LCN2P80188 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LCN2P80188 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN2P80188 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN2P80188 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN2P80188 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN2P80188 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.46■□□□□ 0.71
LCN2P80188 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.46■□□□□ 0.71
LCN2P80188 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
LCN2P80188 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LCN2P80188 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LCN2P80188 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.46■□□□□ 0.71
LCN2P80188 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.46■□□□□ 0.71
LCN2P80188 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN2P80188 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN2P80188 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCN2P80188 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.45■□□□□ 0.7
LCN2P80188 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LCN2P80188 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.45■□□□□ 0.7
LCN2P80188 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN2P80188 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN2P80188 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN2P80188 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN2P80188 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN2P80188 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.44■□□□□ 0.7
LCN2P80188 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.44■□□□□ 0.7
LCN2P80188 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LCN2P80188 AC092028.1-203ENST00000608262 953 ntBASIC19.44■□□□□ 0.7
LCN2P80188 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN2P80188 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN2P80188 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN2P80188 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LCN2P80188 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LCN2P80188 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.43■□□□□ 0.7
LCN2P80188 AC145676.1-201ENST00000514988 2004 ntBASIC19.43■□□□□ 0.7
LCN2P80188 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN2P80188 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCN2P80188 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms