Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
CX3CL1P78423 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CX3CL1P78423 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CX3CL1P78423 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.69■□□□□ 0.58
CX3CL1P78423 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.69■□□□□ 0.58
CX3CL1P78423 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.69■□□□□ 0.58
CX3CL1P78423 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CX3CL1P78423 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CX3CL1P78423 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.68■□□□□ 0.58
CX3CL1P78423 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.68■□□□□ 0.58
CX3CL1P78423 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CX3CL1P78423 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CX3CL1P78423 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 AC138932.3-201ENST00000567634 1902 ntBASIC18.67■□□□□ 0.58
CX3CL1P78423 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.67■□□□□ 0.58
CX3CL1P78423 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.67■□□□□ 0.58
CX3CL1P78423 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.67■□□□□ 0.58
CX3CL1P78423 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.67■□□□□ 0.58
CX3CL1P78423 AC074183.2-201ENST00000623112 922 ntBASIC18.67■□□□□ 0.58
CX3CL1P78423 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CX3CL1P78423 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CX3CL1P78423 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CX3CL1P78423 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.66■□□□□ 0.58
CX3CL1P78423 AC019171.1-201ENST00000601251 1056 ntBASIC18.66■□□□□ 0.58
CX3CL1P78423 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CX3CL1P78423 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CL1P78423 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.65■□□□□ 0.58
CX3CL1P78423 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CL1P78423 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CX3CL1P78423 AL592295.1-201ENST00000400984 884 ntBASIC18.65■□□□□ 0.58
CX3CL1P78423 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.65■□□□□ 0.58
CX3CL1P78423 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
CX3CL1P78423 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CX3CL1P78423 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.64■□□□□ 0.58
CX3CL1P78423 AC133561.1-201ENST00000568600 2415 ntBASIC18.64■□□□□ 0.58
CX3CL1P78423 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CL1P78423 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
CX3CL1P78423 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CX3CL1P78423 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CX3CL1P78423 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CX3CL1P78423 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.63■□□□□ 0.57
CX3CL1P78423 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CX3CL1P78423 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CX3CL1P78423 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CX3CL1P78423 AC012676.1-201ENST00000574705 1949 ntBASIC18.62■□□□□ 0.57
CX3CL1P78423 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 AC010980.1-201ENST00000587192 1142 ntBASIC18.62■□□□□ 0.57
CX3CL1P78423 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.62■□□□□ 0.57
CX3CL1P78423 AP003733.4-201ENST00000623785 1697 ntBASIC18.62■□□□□ 0.57
CX3CL1P78423 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CX3CL1P78423 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CX3CL1P78423 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CX3CL1P78423 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CL1P78423 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.61■□□□□ 0.57
CX3CL1P78423 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CL1P78423 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.61■□□□□ 0.57
CX3CL1P78423 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CX3CL1P78423 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms