Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SFTPBP07988 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SFTPBP07988 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SFTPBP07988 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SFTPBP07988 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.09■□□□□ 0.81
SFTPBP07988 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.09■□□□□ 0.81
SFTPBP07988 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 AC004987.1-201ENST00000428627 508 ntBASIC20.09■□□□□ 0.81
SFTPBP07988 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.09■□□□□ 0.81
SFTPBP07988 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.09■□□□□ 0.81
SFTPBP07988 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.09■□□□□ 0.81
SFTPBP07988 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SFTPBP07988 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SFTPBP07988 ATP5G2P3-201ENST00000429083 425 ntBASIC20.08■□□□□ 0.81
SFTPBP07988 RAP2CP1-202ENST00000605179 643 ntBASIC20.08■□□□□ 0.81
SFTPBP07988 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.08■□□□□ 0.8
SFTPBP07988 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
SFTPBP07988 LINC01124-201ENST00000409786 2117 ntBASIC20.08■□□□□ 0.8
SFTPBP07988 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
SFTPBP07988 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.07■□□□□ 0.8
SFTPBP07988 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 TSPY13P-201ENST00000338964 914 ntBASIC20.07■□□□□ 0.8
SFTPBP07988 AC129492.7-201ENST00000622992 756 ntBASIC20.07■□□□□ 0.8
SFTPBP07988 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SFTPBP07988 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SFTPBP07988 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SFTPBP07988 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.06■□□□□ 0.8
SFTPBP07988 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SFTPBP07988 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.06■□□□□ 0.8
SFTPBP07988 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SFTPBP07988 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.05■□□□□ 0.8
SFTPBP07988 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SFTPBP07988 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SFTPBP07988 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SFTPBP07988 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.05■□□□□ 0.8
SFTPBP07988 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SFTPBP07988 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SFTPBP07988 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.04■□□□□ 0.8
SFTPBP07988 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SFTPBP07988 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SFTPBP07988 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.04■□□□□ 0.8
SFTPBP07988 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SFTPBP07988 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
SFTPBP07988 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SFTPBP07988 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.04■□□□□ 0.8
SFTPBP07988 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SFTPBP07988 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SFTPBP07988 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SFTPBP07988 DUX4L18-201ENST00000553347 1267 ntBASIC20.03■□□□□ 0.8
SFTPBP07988 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SFTPBP07988 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SFTPBP07988 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SFTPBP07988 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SFTPBP07988 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SFTPBP07988 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.02■□□□□ 0.8
SFTPBP07988 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.02■□□□□ 0.8
SFTPBP07988 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SFTPBP07988 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SFTPBP07988 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SFTPBP07988 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SFTPBP07988 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SFTPBP07988 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SFTPBP07988 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SFTPBP07988 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.01■□□□□ 0.79
SFTPBP07988 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms