Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GAPDHP04406 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GAPDHP04406 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GAPDHP04406 ABHD17AP5-201ENST00000580133 923 ntBASIC19.42■□□□□ 0.7
GAPDHP04406 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAPDHP04406 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.42■□□□□ 0.7
GAPDHP04406 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAPDHP04406 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAPDHP04406 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GAPDHP04406 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GAPDHP04406 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GAPDHP04406 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
GAPDHP04406 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.41■□□□□ 0.7
GAPDHP04406 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.41■□□□□ 0.7
GAPDHP04406 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAPDHP04406 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.41■□□□□ 0.7
GAPDHP04406 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAPDHP04406 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAPDHP04406 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAPDHP04406 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.4■□□□□ 0.7
GAPDHP04406 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
GAPDHP04406 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.4■□□□□ 0.7
GAPDHP04406 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAPDHP04406 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAPDHP04406 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GAPDHP04406 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 AL592293.1-201ENST00000502889 1188 ntBASIC19.39■□□□□ 0.69
GAPDHP04406 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.39■□□□□ 0.69
GAPDHP04406 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.39■□□□□ 0.69
GAPDHP04406 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.39■□□□□ 0.69
GAPDHP04406 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
GAPDHP04406 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.39■□□□□ 0.69
GAPDHP04406 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAPDHP04406 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAPDHP04406 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAPDHP04406 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.38■□□□□ 0.69
GAPDHP04406 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAPDHP04406 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GAPDHP04406 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GAPDHP04406 U85056.1-201ENST00000616429 682 ntBASIC19.38■□□□□ 0.69
GAPDHP04406 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GAPDHP04406 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 AC141586.4-201ENST00000624558 1573 ntBASIC19.37■□□□□ 0.69
GAPDHP04406 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAPDHP04406 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAPDHP04406 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAPDHP04406 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAPDHP04406 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.36■□□□□ 0.69
GAPDHP04406 AC018755.3-202ENST00000596210 929 ntBASIC19.36■□□□□ 0.69
GAPDHP04406 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAPDHP04406 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.36■□□□□ 0.69
GAPDHP04406 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAPDHP04406 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAPDHP04406 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAPDHP04406 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAPDHP04406 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAPDHP04406 NTF6A-201ENST00000591175 560 ntBASIC19.34■□□□□ 0.69
GAPDHP04406 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GAPDHP04406 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GAPDHP04406 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GAPDHP04406 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GAPDHP04406 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GAPDHP04406 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GAPDHP04406 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GAPDHP04406 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GAPDHP04406 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.33■□□□□ 0.68
GAPDHP04406 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GAPDHP04406 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GAPDHP04406 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAPDHP04406 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GAPDHP04406 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms