Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.5■■□□□ 1.19
SNRNP200O75643 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.5■■□□□ 1.19
SNRNP200O75643 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.5■■□□□ 1.19
SNRNP200O75643 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SNRNP200O75643 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
SNRNP200O75643 AC137630.3-201ENST00000607245 391 ntBASIC22.49■■□□□ 1.19
SNRNP200O75643 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SNRNP200O75643 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNRNP200O75643 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SNRNP200O75643 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.49■■□□□ 1.19
SNRNP200O75643 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNRNP200O75643 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.49■■□□□ 1.19
SNRNP200O75643 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.48■■□□□ 1.19
SNRNP200O75643 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.48■■□□□ 1.19
SNRNP200O75643 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SNRNP200O75643 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SNRNP200O75643 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNRNP200O75643 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNRNP200O75643 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNRNP200O75643 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNRNP200O75643 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.47■■□□□ 1.19
SNRNP200O75643 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNRNP200O75643 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.46■■□□□ 1.19
SNRNP200O75643 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.46■■□□□ 1.19
SNRNP200O75643 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNRNP200O75643 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SNRNP200O75643 MIR6089-201ENST00000616698 64 ntBASIC22.46■■□□□ 1.19
SNRNP200O75643 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SNRNP200O75643 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNRNP200O75643 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNRNP200O75643 MIR4787-201ENST00000607364 84 ntBASIC22.45■■□□□ 1.18
SNRNP200O75643 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNRNP200O75643 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNRNP200O75643 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNRNP200O75643 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNRNP200O75643 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNRNP200O75643 AC239859.2-201ENST00000444165 318 ntBASIC22.44■■□□□ 1.18
SNRNP200O75643 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNRNP200O75643 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.44■■□□□ 1.18
SNRNP200O75643 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SNRNP200O75643 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.44■■□□□ 1.18
SNRNP200O75643 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNRNP200O75643 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.43■■□□□ 1.18
SNRNP200O75643 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNRNP200O75643 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.43■■□□□ 1.18
SNRNP200O75643 AC090877.2-201ENST00000558441 1738 ntBASIC22.43■■□□□ 1.18
SNRNP200O75643 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNRNP200O75643 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNRNP200O75643 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
SNRNP200O75643 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.43■■□□□ 1.18
SNRNP200O75643 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.43■■□□□ 1.18
SNRNP200O75643 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.42■■□□□ 1.18
SNRNP200O75643 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNRNP200O75643 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
SNRNP200O75643 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNRNP200O75643 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.42■■□□□ 1.18
SNRNP200O75643 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNRNP200O75643 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.42■■□□□ 1.18
SNRNP200O75643 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.42■■□□□ 1.18
SNRNP200O75643 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.42■■□□□ 1.18
SNRNP200O75643 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNRNP200O75643 AC138932.3-201ENST00000567634 1902 ntBASIC22.41■■□□□ 1.18
SNRNP200O75643 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNRNP200O75643 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SNRNP200O75643 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
SNRNP200O75643 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.41■■□□□ 1.18
SNRNP200O75643 SNX5-217ENST00000606557 1087 ntBASIC22.41■■□□□ 1.18
SNRNP200O75643 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SNRNP200O75643 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNRNP200O75643 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.4■■□□□ 1.18
SNRNP200O75643 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SNRNP200O75643 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.4■■□□□ 1.18
SNRNP200O75643 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.4■■□□□ 1.18
SNRNP200O75643 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.4■■□□□ 1.18
SNRNP200O75643 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.4■■□□□ 1.18
SNRNP200O75643 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SNRNP200O75643 KRT125P-201ENST00000546827 989 ntBASIC22.39■■□□□ 1.18
SNRNP200O75643 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.39■■□□□ 1.18
SNRNP200O75643 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SNRNP200O75643 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SNRNP200O75643 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
SNRNP200O75643 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
SNRNP200O75643 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNRNP200O75643 AC021242.3-201ENST00000607598 1377 ntBASIC22.38■■□□□ 1.17
SNRNP200O75643 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNRNP200O75643 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNRNP200O75643 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SNRNP200O75643 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms