Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 AC004812.2-201ENST00000611079 2094 ntBASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV13-2A0A0B4J235 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-2A0A0B4J235 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-2A0A0B4J235 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV13-2A0A0B4J235 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-2A0A0B4J235 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-2A0A0B4J235 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-2A0A0B4J235 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-2A0A0B4J235 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 C9orf163-202ENST00000624034 2573 ntBASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 MIR762-201ENST00000390236 83 ntBASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
TRAV13-2A0A0B4J235 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 ABCB10P4-201ENST00000566803 2184 ntBASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-2A0A0B4J235 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 AC233723.2-201ENST00000623798 2106 ntBASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-2A0A0B4J235 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV13-2A0A0B4J235 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV13-2A0A0B4J235 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV13-2A0A0B4J235 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 CHML-205ENST00000638160 705 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-2A0A0B4J235 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 LINC00565-201ENST00000562710 2331 ntBASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV13-2A0A0B4J235 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV13-2A0A0B4J235 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms