Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC010997.5-201ENST00000609182 354 ntBASIC22.83■■□□□ 1.25
LRIT1Q9P2V4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRIT1Q9P2V4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.83■■□□□ 1.25
LRIT1Q9P2V4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.83■■□□□ 1.24
LRIT1Q9P2V4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LRIT1Q9P2V4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.82■■□□□ 1.24
LRIT1Q9P2V4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRIT1Q9P2V4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRIT1Q9P2V4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
LRIT1Q9P2V4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.82■■□□□ 1.24
LRIT1Q9P2V4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 MTDHP2-201ENST00000601468 714 ntBASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LRIT1Q9P2V4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LRIT1Q9P2V4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 AC019069.1-201ENST00000610008 1333 ntBASIC22.79■■□□□ 1.24
LRIT1Q9P2V4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 AF131216.4-201ENST00000638924 1588 ntBASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 AC010501.1-201ENST00000606270 1962 ntBASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRIT1Q9P2V4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRIT1Q9P2V4 AC090877.2-201ENST00000558441 1738 ntBASIC22.77■■□□□ 1.23
LRIT1Q9P2V4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 MIR6724-1-201ENST00000616420 92 ntBASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 MIR6724-2-201ENST00000616483 92 ntBASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 MIR6724-4-201ENST00000617390 92 ntBASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 MIR6724-3-201ENST00000622482 92 ntBASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
LRIT1Q9P2V4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
LRIT1Q9P2V4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.74■■□□□ 1.23
LRIT1Q9P2V4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 AL117332.1-201ENST00000622628 974 ntBASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRIT1Q9P2V4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 AC092803.2-201ENST00000564287 1899 ntBASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRIT1Q9P2V4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRIT1Q9P2V4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRIT1Q9P2V4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRIT1Q9P2V4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRIT1Q9P2V4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms