Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CSNK1G1Q9HCP0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CSNK1G1Q9HCP0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CSNK1G1Q9HCP0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CSNK1G1Q9HCP0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSNK1G1Q9HCP0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G1Q9HCP0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.71■■□□□ 1.55
CSNK1G1Q9HCP0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.71■■□□□ 1.55
CSNK1G1Q9HCP0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CSNK1G1Q9HCP0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
CSNK1G1Q9HCP0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CSNK1G1Q9HCP0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 MIR6089-201ENST00000616698 64 ntBASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
CSNK1G1Q9HCP0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 BX664725.1-201ENST00000438252 379 ntBASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 AC239859.2-201ENST00000444165 318 ntBASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.69■■□□□ 1.54
CSNK1G1Q9HCP0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CSNK1G1Q9HCP0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSNK1G1Q9HCP0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CSNK1G1Q9HCP0 AC021242.3-201ENST00000607598 1377 ntBASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 AF131216.4-201ENST00000638924 1588 ntBASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSNK1G1Q9HCP0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 GUSBP5-201ENST00000418136 578 ntBASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CSNK1G1Q9HCP0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSNK1G1Q9HCP0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CSNK1G1Q9HCP0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
CSNK1G1Q9HCP0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.64■■□□□ 1.54
CSNK1G1Q9HCP0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.64■■□□□ 1.53
CSNK1G1Q9HCP0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.63■■□□□ 1.53
CSNK1G1Q9HCP0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.63■■□□□ 1.53
CSNK1G1Q9HCP0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CSNK1G1Q9HCP0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G1Q9HCP0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CSNK1G1Q9HCP0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 KRT125P-201ENST00000546827 989 ntBASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSNK1G1Q9HCP0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 MIR4787-201ENST00000607364 84 ntBASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CSNK1G1Q9HCP0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms