Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH18Q9HCL0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH18Q9HCL0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH18Q9HCL0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH18Q9HCL0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH18Q9HCL0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDH18Q9HCL0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH18Q9HCL0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH18Q9HCL0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH18Q9HCL0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH18Q9HCL0 AC004987.1-201ENST00000428627 508 ntBASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 LONRF2P2-201ENST00000439212 571 ntBASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PCDH18Q9HCL0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PCDH18Q9HCL0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 LINC01124-201ENST00000409786 2117 ntBASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 ATP5G2P3-201ENST00000429083 425 ntBASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDH18Q9HCL0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH18Q9HCL0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH18Q9HCL0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH18Q9HCL0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH18Q9HCL0 AL592295.1-201ENST00000400984 884 ntBASIC24.26■■□□□ 1.47
PCDH18Q9HCL0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDH18Q9HCL0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDH18Q9HCL0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDH18Q9HCL0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 AC139795.1-202ENST00000500444 432 ntBASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDH18Q9HCL0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 HLA-L-211ENST00000482052 1765 ntBASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 TSPY13P-201ENST00000338964 914 ntBASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDH18Q9HCL0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms